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Detail Information of piRNA: piR-hsa-2946

General Information
piRBase Id piR-hsa-2946 Accession DQ572622
Organism Human Number of methods 1
Sequence TCAAATCGATGAGATTGTCACTGAGACCCTGT Number of papers 2
Length 32 Golden piRNA -
Aliases piR-40734; PIR33733;
Datasets
Dataset Accession Reads PubMed Method Tissue
1 N/A N/A 16751776 small RNA testis
168 GSM1584522 1 25818294 small RNA adult ovary
Location in GRCh38
1 best hit(s) with 0 mismatch(es) in GRCh38
No. Location Gene RepeatMaker
Location 1 17:78403772-78403804:+ PGS1 ENST00000262764; PGS1 ENST00000589425; PGS1 ENST00000589689; PGS1 ENST00000589426; PGS1 ENST00000588169; PGS1 ENST00000585521; PGS1 ENST00000588281; PGS1 ENST00000591996;
piRNA Expression
Sample CPM
GSM1584521 0
GSM1584522 0.6903
GSM1584523 0
GSM1584524 0
GSM1584525 0
GSM1584526 0
Sample CPM
GSM1584527 0
GSM1584528 0
GSM1584529 0
GSM1584530 0
GSM1584531 0
GSM1584532 0
The Expression of piRNA: piR-hsa-2946
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P value calculation
Sample1
Sample2
Target mRNA
No record.
Target lncRNA
No record.
Target Network
No record.
Disease Information
No record.
Reference
PubMed 16751776 Journal Nature. 2006 Jul 13;442(7099):199-202.
Title A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors Girard A, Sachidanandam R, Hannon GJ, Carmell MA.
PubMed 25818294 Journal Cell Rep. 2015 Mar 31;10(12):2069-82.
Title Piwi proteins and piRNAs in mammalian oocytes and early embryos.
Authors Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA, Ketting RF.