Detail Information of piRNA: piR-hsa-27493

Dataset	Accession	Reads	PubMed	Method	Tissue
1	N/A	N/A	16751776	small RNA	testis
167	GSM1584521	21	25818294	small RNA	adult ovary
168	GSM1584522	139	25818294	small RNA	adult ovary
169	GSM1584523	57	25818294	oxidized small RNA	adult ovary
170	GSM1584524	49	25818294	oxidized small RNA	adult ovary
171	GSM1584525	17	25818294	small RNA	ovary from 1st trimester embryos
172	GSM1584526	7	25818294	small RNA	ovary from 1st trimester embryos
173	GSM1584527	6	25818294	oxidized small RNA	ovary from 1st trimester embryos
175	GSM1584529	93	25818294	small RNA	ovary from 2nd trimester embryos
176	GSM1584530	577	25818294	small RNA	ovary from 2nd trimester embryos
177	GSM1584531	28	25818294	oxidized small RNA	ovary from 2nd trimester embryos
178	GSM1584532	1	25818294	oxidized small RNA	ovary from 2nd trimester embryos
289	GSM1386593	4182	26095918	samll RNA	Lung(cell line: HBE2; cell type: Immortalized bronchial epithelial)
290	GSM1386594	2098	26095918	samll RNA	Lung(cell line: HBE3; cell type: Immortalized bronchial epithelial)
291	GSM1386595	6964	26095918	samll RNA	Lung(cell line: HBE4; cell type: Immortalized bronchial epithelial)
292	GSM1386596	9325	26095918	samll RNA	Lung(cell line: H522; cell type: Adenocarcinoma (NSCLC))
293	GSM1386597	798	26095918	samll RNA	Lung(cell line: H1437; cell type: Adenocarcinoma (NSCLC))
294	GSM1386598	801	26095918	samll RNA	Lung(cell line: H1792; cell type: Adenocarcinoma (NSCLC))
295	GSM1386599	909	26095918	samll RNA	Lung(cell line: H1944; cell type: Adenocarcinoma (NSCLC))
296	GSM1386600	2030	26095918	samll RNA	Lung(cell line: H157; cell type: Squamous (NSCLC))
297	GSM1386601	9845	26095918	samll RNA	Lung(cell line: H226; cell type: Squamous (NSCLC))
298	GSM1386602	1643	26095918	samll RNA	Lung(cell line: H596; cell type: Squamous (NSCLC))
299	GSM1386603	6712	26095918	samll RNA	Lung(cell line: SKMES1; cell type: Squamous (NSCLC))
300	GSM2222674	2634	29516567	small RNA	neuroblastoma cell lines (IMR-32)
301	GSM2222675	16417	29516567	small RNA	neuroblastoma cell lines (SH-SY-5Y)
302	GSM4585035	4	32668808	small RNA	Brain, Neurosurgical fluid, Extracellular Vesicles(Glioblastoma, Grade IV astrocytoma)
304	GSM4585037	22	32668808	small RNA	Brain, Neurosurgical fluid, Extracellular Vesicles(Glioblastoma, Grade IV astrocytoma)
306	GSM4585039	9	32668808	small RNA	Brain, Neurosurgical fluid, Extracellular Vesicles(Glioblastoma, Grade IV astrocytoma)
308	GSM4585041	130	32668808	small RNA	Brain, Neurosurgical fluid, Extracellular Vesicles(Glioblastoma, Grade IV astrocytoma)
309	GSM4585042	18	32668808	small RNA	Brain, Neurosurgical fluid, Extracellular Vesicles(Glioblastoma, Grade IV astrocytoma)
310	GSM4585043	52	32668808	small RNA	Brain, Neurosurgical fluid, Extracellular Vesicles(Glioblastoma, Grade IV astrocytoma)
311	GSM4585044	46	32668808	small RNA	Brain, Neurosurgical fluid, Extracellular Vesicles(Glioblastoma, Grade IV astrocytoma)
312	GSM4585045	17	32668808	small RNA	Brain, Neurosurgical fluid, Extracellular Vesicles(Glioblastoma, Grade IV astrocytoma)
314	GSM4585047	13	32668808	small RNA	Brain, Neurosurgical fluid, Extracellular Vesicles(Glioma, Grade II-III astrocytoma)
315	GSM4585048	27	32668808	small RNA	Brain, Neurosurgical fluid, Extracellular Vesicles(Glioma, Grade II-III astrocytoma)
316	GSM4585049	25	32668808	small RNA	Brain, Neurosurgical fluid, Extracellular Vesicles(Glioma, Grade II-III astrocytoma)
317	GSM4585050	36	32668808	small RNA	Brain, Neurosurgical fluid, Extracellular Vesicles(Glioma, Grade II-III astrocytoma)
318	GSM4585051	16	32668808	small RNA	Brain, Neurosurgical fluid, Extracellular Vesicles(Glioma, Grade II-III astrocytoma)
320	GSM4020157	1050	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 59 years; Male; Monolayer culture control
321	GSM4020158	1317	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 59 years; Male; Monolayer culture control
322	GSM4020159	2085	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 80 years; Male; Monolayer culture control
323	GSM4020160	1482	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 80 years; Male; Monolayer culture control
324	GSM4020161	1345	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 55 years; Femal; Monolayer culture contro
325	GSM4020162	1486	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 55 years; Female; Monolayer culture contr
326	GSM4020163	2248	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 59 years; Male; Osteogenic differentiatio
327	GSM4020164	1567	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 59 years; Male; Osteogenic differentiatio
328	GSM4020165	2623	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 80 years; Male; Osteogenic differentiatio
329	GSM4020166	2127	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 80 years; Male; Osteogenic differentiatio
330	GSM4020167	2279	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 55 years; Female; Osteogenic differentiat
331	GSM4020168	2234	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 55 years; Female; Osteogenic differentiat
332	GSM4020169	2997	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 59 years; Male; Pellet culture control (d
333	GSM4020170	8121	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 59 years; Male; Pellet culture control (d
334	GSM4020171	2832	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 80 years; Male; Pellet culture control (d
335	GSM4020172	3319	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 80 years; Male; Pellet culture control (d
336	GSM4020173	2790	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 55 years; Female; Pellet culture control
337	GSM4020174	2955	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 55 years; Female; Pellet culture control
338	GSM4020175	4476	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 59 years; Male; Chondrogenic differentiat
339	GSM4020176	7351	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 59 years; Male; Chondrogenic differentiat
340	GSM4020177	1493	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 80 years; Male; Chondrogenic differentiat
341	GSM4020178	2690	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 80 years; Male; Chondrogenic differentiat
342	GSM4020179	1177	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 55 years; Female; Chondrogenic differenti
343	GSM4020180	1201	32050423	small RNA	mesenchymal stromal cells from bone marrow (vertebra)(age: 55 years; Female; Chondrogenic differenti
430	GSM2067753	358	27068805	small RNA	Seminal plasma(fertile healthy)
431	GSM2067754	60	27068805	small RNA	Seminal plasma(asthenozoospermia)
432	GSM2067755	156	27068805	small RNA	Seminal plasma(azoospermia)

1 best hit(s) with 0 mismatch(es) in GRCh38

No.	Location	Gene	RepeatMaker
Location 1	1:229537856-229537886:+	ABCB10 ENST00000344517;	tRNA tRNA tRNA-Gly-GGY;

PubMed	16751776	Journal	Nature. 2006 Jul 13;442(7099):199-202.
Title	A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors	Girard A, Sachidanandam R, Hannon GJ, Carmell MA.

PubMed	25818294	Journal	Cell Rep. 2015 Mar 31;10(12):2069-82.
Title	Piwi proteins and piRNAs in mammalian oocytes and early embryos.
Authors	Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA, Ketting RF.

PubMed	26095918	Journal	Nat Commun. 2015 Jun 22;6:7316. doi: 10.1038/ncomms8316.
Title	A piRNA-like small RNA interacts with and modulates p-ERM proteins in human somatic cells.
Authors	Mei Y, Wang Y, Kumari P, Shetty AC, Clark D, Gable T, MacKerell AD, Ma MZ, Weber DJ, Yang AJ, Edelman MJ, Mao L.

PubMed	29516567	Journal	Genes Chromosomes Cancer. 2018 Jul;57(7):339-349. doi: 10.1002/gcc.22535.
Title	Investigating piwi-interacting RNA regulome in human neuroblastoma.
Authors	Roy J, Mallick B.

PubMed	32668808	Journal	Int J Mol Sci. 2020 Jul 13;21(14):4954. doi: 10.3390/ijms21144954.
Title	Deep Sequencing of Small RNAs from Neurosurgical Extracellular Vesicles Substantiates miR-486-3p as a Circulating Biomarker that Distinguishes Glioblastoma from Lower-Grade Astrocytoma Patients.
Authors	Hallal S, Ebrahim Khani S, Wei H, Lee MYT, Sim HW, Sy J, Shivalingam B, Buckland ME, Alexander-Kaufman KL.

PubMed	32050423	Journal	Cells. 2020 Feb 9;9(2):398. doi: 10.3390/cells9020398.
Title	Differential Regulation of circRNA, miRNA, and piRNA during Early Osteogenic and Chondrogenic Differentiation of Human Mesenchymal Stromal Cells.
Authors	Della Bella E, Menzel U, Basoli V, Tourbier C, Alini M, Stoddart MJ.

PubMed	27068805	Journal	Sci Rep. 2016 Apr 12;6:24229. doi: 10.1038/srep24229.
Title	Systematic characterization of seminal plasma piRNAs as molecular biomarkers for male infertility.
Authors	Hong Y, Wang C, Fu Z, Liang H, Zhang S, Lu M, Sun W, Ye C, Zhang CY, Zen K, Shi L, Zhang C, Chen X.

PubMed	23229900	Journal	Clin Transl Oncol. 2013 Jul;15(7):563-8. doi: 10.1007/s12094-012-0966-0. Epub 2012 Nov 15.
Title	Altered expression of piRNAs and their relation with clinicopathologic features of breast cancer.
Authors	Huang G, Hu H, Xue X, Shen S, Gao E, Guo G, Shen X, Zhang X.