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Detail Information of piRNA: piR-hsa-1934681

General Information
piRBase Id piR-hsa-1934681 Accession N/A
Organism Human Number of methods 2
Sequence AAAGATTTCCGTGGAGAGGAACGAG Number of papers 1
Length 25 Golden piRNA -
Aliases N/A
Datasets
Dataset Accession Reads PubMed Method Tissue
171 GSM1584525 1 25818294 small RNA ovary from 1st trimester embryos
173 GSM1584527 1 25818294 oxidized small RNA ovary from 1st trimester embryos
Location in GRCh38
1 best hit(s) with 1 mismatch(es) in GRCh38
No. Location Gene RepeatMaker
Location 1 1:11908197-11908222:+ ENSG00000285646 ENST00000661075; ENSG00000285646 ENST00000649268; ENSG00000285646 ENST00000650448; ENSG00000285646 ENST00000666735; ENSG00000285646 ENST00000660618; ENSG00000285646 ENST00000658167; RNU5E-1 ENST00000362477; snRNA snRNA U5;
piRNA Expression
Sample CPM
GSM1584521 0
GSM1584522 0
GSM1584523 0
GSM1584524 0
GSM1584525 0.6307
GSM1584526 0
Sample CPM
GSM1584527 1.4384
GSM1584528 0
GSM1584529 0
GSM1584530 0
GSM1584531 0
GSM1584532 0
The Expression of piRNA: piR-hsa-1934681
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P value calculation
Sample1
Sample2
Target mRNA
No record.
Target lncRNA
No record.
Target Network
No record.
Disease Information
No record.
Reference
PubMed 25818294 Journal Cell Rep. 2015 Mar 31;10(12):2069-82.
Title Piwi proteins and piRNAs in mammalian oocytes and early embryos.
Authors Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA, Ketting RF.