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Detail Information of piRNA: piR-hsa-1872316

General Information
piRBase Id piR-hsa-1872316 Accession N/A
Organism Human Number of methods 1
Sequence ATGTAGAGCACATGTTATGGTTATCGAAGTGG Number of papers 1
Length 32 Golden piRNA -
Aliases N/A
Datasets
Dataset Accession Reads PubMed Method Tissue
171 GSM1584525 1 25818294 small RNA ovary from 1st trimester embryos
172 GSM1584526 1 25818294 small RNA ovary from 1st trimester embryos
175 GSM1584529 1 25818294 small RNA ovary from 2nd trimester embryos
Location in GRCh38
1 best hit(s) with 1 mismatch(es) in GRCh38
No. Location Gene RepeatMaker
Location 1 1:16905203-16905235:+ CROCC ENST00000466256;
piRNA Expression
Sample CPM
GSM1584521 0
GSM1584522 0
GSM1584523 0
GSM1584524 0
GSM1584525 0.6307
GSM1584526 0.6475
Sample CPM
GSM1584527 0
GSM1584528 0
GSM1584529 0.4447
GSM1584530 0
GSM1584531 0
GSM1584532 0
The Expression of piRNA: piR-hsa-1872316
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P value calculation
Sample1
Sample2
Target mRNA
No record.
Target lncRNA
No record.
Target Network
No record.
Disease Information
No record.
Reference
PubMed 25818294 Journal Cell Rep. 2015 Mar 31;10(12):2069-82.
Title Piwi proteins and piRNAs in mammalian oocytes and early embryos.
Authors Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA, Ketting RF.