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Detail Information of piRNA: piR-hsa-146690

General Information
piRBase Id piR-hsa-146690 Accession N/A
Organism Human Number of methods 2
Sequence TCACTGATGAGAGCATTGTTCTGAGA Number of papers 1
Length 26 Golden piRNA -
Aliases N/A
Datasets
Dataset Accession Reads PubMed Method Tissue
167 GSM1584521 1 25818294 small RNA adult ovary
168 GSM1584522 2 25818294 small RNA adult ovary
172 GSM1584526 1 25818294 small RNA ovary from 1st trimester embryos
173 GSM1584527 1 25818294 oxidized small RNA ovary from 1st trimester embryos
Location in GRCh38
1 best hit(s) with 1 mismatch(es) in GRCh38
No. Location Gene RepeatMaker
Location 1 1:30968167-30968193:- PUM1 ENST00000426105; PUM1 ENST00000373747; PUM1 ENST00000257075; PUM1 ENST00000424085; PUM1 ENST00000525843; PUM1 ENST00000440538; PUM1 ENST00000498419; PUM1 ENST00000373741; PUM1 ENST00000373742; PUM1 ENST00000471894; PUM1 ENST00000490546; PUM1 ENST00000532678;
piRNA Expression
Sample CPM
GSM1584521 0.8987
GSM1584522 1.3806
GSM1584523 0
GSM1584524 0
GSM1584525 0
GSM1584526 0.6475
Sample CPM
GSM1584527 1.4384
GSM1584528 0
GSM1584529 0
GSM1584530 0
GSM1584531 0
GSM1584532 0
The Expression of piRNA: piR-hsa-146690
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P value calculation
Sample1
Sample2
Target mRNA
No record.
Target lncRNA
No record.
Target Network
No record.
Disease Information
No record.
Reference
PubMed 25818294 Journal Cell Rep. 2015 Mar 31;10(12):2069-82.
Title Piwi proteins and piRNAs in mammalian oocytes and early embryos.
Authors Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA, Ketting RF.