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Detail Information of piRNA: piR-hsa-14318

General Information
piRBase Id piR-hsa-14318 Accession DQ584082
Organism Human Number of methods 2
Sequence TGCCAAACAGGATGGACATAGATTGTTAGT Number of papers 4
Length 30 Golden piRNA Y
Aliases piR-51194; PIR45193;
Datasets
Dataset Accession Reads PubMed Method Tissue
1 N/A N/A 16751776 small RNA testis
167 GSM1584521 1 25818294 small RNA adult ovary
168 GSM1584522 1 25818294 small RNA adult ovary
169 GSM1584523 2 25818294 oxidized small RNA adult ovary
175 GSM1584529 36 25818294 small RNA ovary from 2nd trimester embryos
176 GSM1584530 6 25818294 small RNA ovary from 2nd trimester embryos
177 GSM1584531 291 25818294 oxidized small RNA ovary from 2nd trimester embryos
178 GSM1584532 2 25818294 oxidized small RNA ovary from 2nd trimester embryos
269 GSM3517638 N/A 31358756 samll RNA(CAS-seq) oocyte(age: adult)
275 GSM3517645 N/A 31358756 samll RNA(CAS-seq) 2 cell embryo(age: adult; spike in)
277 GSM3517647 N/A 31358756 samll RNA(CAS-seq) morula embryo(age: adult; spike in)
430 GSM2067753 1 27068805 small RNA Seminal plasma(fertile healthy)
Location in GRCh38
1 best hit(s) with 0 mismatch(es) in GRCh38
No. Location Gene RepeatMaker
Location 1 4:10123614-10123644:+
piRNA Expression
Sample CPM
GSM1584521 0.8987
GSM1584522 0.6903
GSM1584523 1.9036
GSM1584524 0
GSM1584525 0
GSM1584526 0
Sample CPM
GSM1584527 0
GSM1584528 0
GSM1584529 16.0107
GSM1584530 2.9452
GSM1584531 35.7337
GSM1584532 2.509
The Expression of piRNA: piR-hsa-14318
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P value calculation
Sample1
Sample2
Target mRNA
No record.
Target lncRNA
No record.
Target Network
No record.
Disease Information
No record.
Reference
PubMed 16751776 Journal Nature. 2006 Jul 13;442(7099):199-202.
Title A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors Girard A, Sachidanandam R, Hannon GJ, Carmell MA.
PubMed 25818294 Journal Cell Rep. 2015 Mar 31;10(12):2069-82.
Title Piwi proteins and piRNAs in mammalian oocytes and early embryos.
Authors Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA, Ketting RF.
PubMed 31358756 Journal Nat Commun. 2019 Jul 29;10(1):3389. doi: 10.1038/s41467-019-11312-8.
Title Single-cell CAS-seq reveals a class of short PIWI-interacting RNAs in human oocytes.
Authors Yang Q, Li R, Lyu Q, Hou L, Liu Z, Sun Q, Liu M, Shi H, Xu B, Yin M, Yan Z,Huang Y, Liu M, Li Y, Wu L.
PubMed 27068805 Journal Sci Rep. 2016 Apr 12;6:24229. doi: 10.1038/srep24229.
Title Systematic characterization of seminal plasma piRNAs as molecular biomarkers for male infertility.
Authors Hong Y, Wang C, Fu Z, Liang H, Zhang S, Lu M, Sun W, Ye C, Zhang CY, Zen K, Shi L, Zhang C, Chen X.