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Detail Information of piRNA: piR-hsa-142085

General Information
piRBase Id piR-hsa-142085 Accession N/A
Organism Human Number of methods 2
Sequence TTCACTGATGAGAGCATTGTTCTGAA Number of papers 1
Length 26 Golden piRNA -
Aliases N/A
Datasets
Dataset Accession Reads PubMed Method Tissue
167 GSM1584521 5 25818294 small RNA adult ovary
168 GSM1584522 18 25818294 small RNA adult ovary
170 GSM1584524 1 25818294 oxidized small RNA adult ovary
171 GSM1584525 1 25818294 small RNA ovary from 1st trimester embryos
172 GSM1584526 1 25818294 small RNA ovary from 1st trimester embryos
176 GSM1584530 5 25818294 small RNA ovary from 2nd trimester embryos
Location in GRCh38
1 best hit(s) with 1 mismatch(es) in GRCh38
No. Location Gene RepeatMaker
Location 1 1:30968168-30968194:- PUM1 ENST00000426105; PUM1 ENST00000373747; PUM1 ENST00000257075; PUM1 ENST00000424085; PUM1 ENST00000525843; PUM1 ENST00000440538; PUM1 ENST00000498419; PUM1 ENST00000373741; PUM1 ENST00000373742; PUM1 ENST00000471894; PUM1 ENST00000490546; PUM1 ENST00000532678;
piRNA Expression
Sample CPM
GSM1584521 4.4936
GSM1584522 12.4257
GSM1584523 0
GSM1584524 0.872
GSM1584525 0.6307
GSM1584526 0.6475
Sample CPM
GSM1584527 0
GSM1584528 0
GSM1584529 0
GSM1584530 2.4544
GSM1584531 0
GSM1584532 0
The Expression of piRNA: piR-hsa-142085
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P value calculation
Sample1
Sample2
Target mRNA
No record.
Target lncRNA
No record.
Target Network
No record.
Disease Information
No record.
Reference
PubMed 25818294 Journal Cell Rep. 2015 Mar 31;10(12):2069-82.
Title Piwi proteins and piRNAs in mammalian oocytes and early embryos.
Authors Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA, Ketting RF.