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Detail Information of piRNA: piR-hsa-139589

General Information
piRBase Id piR-hsa-139589 Accession N/A
Organism Human Number of methods 2
Sequence GTTCACTGATGAGAGCATTGTTCTGAGA Number of papers 1
Length 28 Golden piRNA -
Aliases N/A
Datasets
Dataset Accession Reads PubMed Method Tissue
167 GSM1584521 63 25818294 small RNA adult ovary
168 GSM1584522 68 25818294 small RNA adult ovary
169 GSM1584523 3 25818294 oxidized small RNA adult ovary
171 GSM1584525 7 25818294 small RNA ovary from 1st trimester embryos
172 GSM1584526 9 25818294 small RNA ovary from 1st trimester embryos
175 GSM1584529 3 25818294 small RNA ovary from 2nd trimester embryos
176 GSM1584530 22 25818294 small RNA ovary from 2nd trimester embryos
Location in GRCh38
1 best hit(s) with 1 mismatch(es) in GRCh38
No. Location Gene RepeatMaker
Location 1 1:30968167-30968195:- PUM1 ENST00000426105; PUM1 ENST00000373747; PUM1 ENST00000257075; PUM1 ENST00000424085; PUM1 ENST00000525843; PUM1 ENST00000440538; PUM1 ENST00000498419; PUM1 ENST00000373741; PUM1 ENST00000373742; PUM1 ENST00000471894; PUM1 ENST00000490546; PUM1 ENST00000532678;
piRNA Expression
Sample CPM
GSM1584521 56.6191
GSM1584522 46.9414
GSM1584523 2.8554
GSM1584524 0
GSM1584525 4.4152
GSM1584526 5.8271
Sample CPM
GSM1584527 0
GSM1584528 0
GSM1584529 1.3342
GSM1584530 10.7992
GSM1584531 0
GSM1584532 0
The Expression of piRNA: piR-hsa-139589
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P value calculation
Sample1
Sample2
Target mRNA
No record.
Target lncRNA
No record.
Target Network
No record.
Disease Information
No record.
Reference
PubMed 25818294 Journal Cell Rep. 2015 Mar 31;10(12):2069-82.
Title Piwi proteins and piRNAs in mammalian oocytes and early embryos.
Authors Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA, Ketting RF.