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Detail Information of piRNA: piR-hsa-11200

General Information
piRBase Id piR-hsa-11200 Accession DQ580871
Organism Human Number of methods 2
Sequence TGAGGAGTGTTACTGGTGATGTTAAC Number of papers 2
Length 26 Golden piRNA -
Aliases piR-48983; PIR41982;
Datasets
Dataset Accession Reads PubMed Method Tissue
1 N/A N/A 16751776 small RNA testis
173 GSM1584527 1 25818294 oxidized small RNA ovary from 1st trimester embryos
Location in GRCh38
1 best hit(s) with 0 mismatch(es) in GRCh38
No. Location Gene RepeatMaker
Location 1 17:64490301-64490327:- POLG2 ENST00000539111; POLG2 ENST00000581355; POLG2 ENST00000671755; POLG2 ENST00000673460; POLG2 ENST00000585104; POLG2 ENST00000577506; POLG2 ENST00000585141; POLG2 ENST00000578687; LINE L1 L1MC4;
piRNA Expression
Sample CPM
GSM1584521 0
GSM1584522 0
GSM1584523 0
GSM1584524 0
GSM1584525 0
GSM1584526 0
Sample CPM
GSM1584527 1.4384
GSM1584528 0
GSM1584529 0
GSM1584530 0
GSM1584531 0
GSM1584532 0
The Expression of piRNA: piR-hsa-11200
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P value calculation
Sample1
Sample2
Target mRNA
No record.
Target lncRNA
No record.
Target Network
No record.
Disease Information
No record.
Reference
PubMed 16751776 Journal Nature. 2006 Jul 13;442(7099):199-202.
Title A germline-specific class of small RNAs binds mammalian Piwi proteins
Authors Girard A, Sachidanandam R, Hannon GJ, Carmell MA.
PubMed 25818294 Journal Cell Rep. 2015 Mar 31;10(12):2069-82.
Title Piwi proteins and piRNAs in mammalian oocytes and early embryos.
Authors Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA, Ketting RF.