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Detail Information of piRNA: piR-hsa-1048640

General Information

piRBase Id	piR-hsa-1048640	Accession	N/A
Organism	Human	Number of methods	1
Sequence	CTGGGTCTCCAGAAACACTAGCTCTCAG	Number of papers	1
Length	28	Golden piRNA	-
Aliases	N/A

Datasets

Dataset	Accession	Reads	PubMed	Method	Tissue
170	GSM1584524	1	25818294	oxidized small RNA	adult ovary

Location in GRCh38

1 best hit(s) with 0 mismatch(es) in GRCh38

No.	Location	Gene	RepeatMaker
Location 1	2:106838592-106838620:-	ST6GAL2 ENST00000361686; ST6GAL2 ENST00000409382; ST6GAL2 ENST00000409087; ENSG00000227294 ENST00000425419;	SINE MIR MIR;

piRNA Expression

Sample	CPM
GSM1584521	0
GSM1584522	0
GSM1584523	0
GSM1584524	0.872
GSM1584525	0
GSM1584526	0

Sample	CPM
GSM1584527	0
GSM1584528	0
GSM1584529	0
GSM1584530	0
GSM1584531	0
GSM1584532	0

The Expression of piRNA: piR-hsa-1048640

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P value calculation

Sample1

Sample2

Target mRNA

No record.

Target lncRNA

No record.

Target Network

No record.

Disease Information

No record.

Reference

PubMed	25818294	Journal	Cell Rep. 2015 Mar 31;10(12):2069-82.
Title	Piwi proteins and piRNAs in mammalian oocytes and early embryos.
Authors	Roovers EF, Rosenkranz D, Mahdipour M, Han CT, He N, Chuva de Sousa Lopes SM, van der Westerlaken LA, Zischler H, Butter F, Roelen BA, Ketting RF.