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Detail Information of piRNA: piR-gga-3

General Information
piRBase Id piR-gga-3 Accession N/A
Organism Chicken Number of methods 2
Sequence TGTAAACATCCCCGACTGGAAGCT Number of papers 2
Length 24 Golden piRNA -
Aliases N/A
Datasets
Dataset Accession Reads PubMed Method Tissue
39 GSM710257 50802 22418847 Small RNA stage X embryos
40 GSM710258 260146 22418847 Small RNA stage HH10 embryos
453 GSM1096598 24955 23523368 small RNA Wild Type Adult testes
454 GSM1096613 432 23523368 oxidized small RNA Wild Type Adult testes
Location in GRCg6
1 best hit(s) with 0 mismatch(es) in GRCg6
No. Location Gene RepeatMaker
Location 1 2:142647772-142647796:- ENSGALG00000047850 ENSGALT00000104123; gga-mir-30d ENSGALT00000028997;
piRNA Expression
No record.
Target mRNA
No record.
Target lncRNA
No record.
Target Network
No record.
Disease Information
No record.
Reference
PubMed 22418847 Journal RNA Biol. 2012 Feb;9(2):212-27.
Title Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation.
Authors Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH.
PubMed 23523368 Journal Mol Cell. 2013 Apr 11;50(1):67-81. doi: 10.1016/j.molcel.2013.02.016.
Title An ancient transcription factor initiates the burst of piRNA production during early meiosis in mouse testes
Authors Li XZ, Roy CK, Dong X, Bolcun-Filas E et al.