The statistics of new interactions in NPInter database New!
| Data Source |
The Number of Interactions |
| CLIP-seq |
272,374 |
| AGO CLIP-seq |
457,840 |
| ChIRP-seq |
888,915 |
| Literature Mining |
1,386 |
The statistics of interactions in different classes in NPInter database
| Class |
The Number of Interactions |
| Binding |
1,093,784 |
| Regulatory |
138,868 |
| Expression Correlation |
383 |
| Coexpression |
61 |
The statistics of interactions in different levels in NPInter database
| Level |
The Number of Interactions |
| RNA-RNA |
609,020 |
| RNA-Protein |
488,315 |
| RNA-DNA |
892,737 |
| RNA-TF |
5 |
The statistics of interactions in different data sources in NPInter database
| Data Sources |
The Number of Interactions |
| High-throughput data |
498,083 |
| miRanda with Ago CLIP data |
321,503 |
| TargetScan with Ago CLIP data |
139,157 |
| RISE Database |
129,585 |
| Literature mining |
9,595 |
| miRanda and TargetScan with Ago CLIP data |
3,383 |
The statistics of interactions in different species in NPInter database
| Organisms |
The Number of Interactions |
| Homo sapiens |
877,002 |
| Mus musculus |
222,384 |
| Saccharomyces cerevisiae |
543 |
| Agrobacterium tumefaciens |
208 |
| Escherichia coli |
78 |
| Caenorhabditis elegans |
66 |
| Drosophila melanogaster |
54 |
| Kaposi sarcoma-associated herpesvirus |
41 |
| Others |
242 |