Interaction Profile
Interaction ID
ncRI-40650215
Interaction Molecules
hsa-miR-548b-3p -- ITSN1
Interaction Level
RNA-RNA
Interaction Class
binding
Data Source
miRanda with Ago CLIP data
Tags
Organism
Homo sapiens
Tissue or Cell Type
T-REx-293T;Cingulategyrus
Experiment
AGO CLIP
Description
Conserved miRNAs target sites predicted by miRanda overlap with the AGO CLIP dataset
Molecule Profile
Alias
-
Class
mRNA
Ensembl id
ENSG00000205726
Description
mRNA
Reference Information
| Pubmed ID | 24389009 | Journal | Neuron |
|---|---|---|---|
| Title | Transcriptome-wide discovery of microRNA binding sites in human brain. | ||
| Author | Boudreau RL, Jiang P, Gilmore BL, Spengler RM, Tirabassi R, Nelson JA, Ross CA, Xing Y, Davidson BL | ||
| Pubmed ID | 29273203 | Journal | Journal of molecular biology |
|---|---|---|---|
| Title | Transcriptome-wide Identification and Validation of Interactions between the miRNA Machinery and HuR on mRNA Targets. | ||
| Author | Li Y, Estep JA, Karginov FV | ||
Network View
Disease Annotation
| Molecule | Disease | Data Source |
|---|---|---|
| hsa-miR-548b-3p | adenocarcinoma | MNDR Database |
| hsa-miR-548b-3p | arthritis | MNDR Database |
| hsa-miR-548b-3p | asthma | MNDR Database |
| hsa-miR-548b-3p | astrocytoma | MNDR Database |
| hsa-miR-548b-3p | autosomal recessive disease | MNDR Database |
| hsa-miR-548b-3p | Barrett's adenocarcinoma | MNDR Database |
| hsa-miR-548b-3p | bone disease | MNDR Database |
| hsa-miR-548b-3p | brain disease | MNDR Database |
| hsa-miR-548b-3p | breast cancer | MNDR Database |
| hsa-miR-548b-3p | Breast Neoplasms | MNDR Database |
| hsa-miR-548b-3p | cancer | MNDR Database |
| hsa-miR-548b-3p | carcinoma | MNDR Database |
| hsa-miR-548b-3p | cholangiocarcinoma | MNDR Database |
| hsa-miR-548b-3p | colon cancer | MNDR Database |
| hsa-miR-548b-3p | colorectal cancer | MNDR Database |
| hsa-miR-548b-3p | diabetes mellitus | MNDR Database |
| hsa-miR-548b-3p | embryonal cancer | MNDR Database |
| hsa-miR-548b-3p | eye disease | MNDR Database |
| hsa-miR-548b-3p | familiar ovarian carcinoma | MNDR Database |
| hsa-miR-548b-3p | frontotemporal dementia | MNDR Database |
| hsa-miR-548b-3p | Glioblastoma | MNDR Database |
| hsa-miR-548b-3p | Growth Hormone-Secreting Pituitary Adenoma | MNDR Database |
| hsa-miR-548b-3p | head and neck cancer | MNDR Database |
| hsa-miR-548b-3p | head and neck squamous cell carcinoma | MNDR Database |
| hsa-miR-548b-3p | heart disease | MNDR Database |
| hsa-miR-548b-3p | hepatocellular carcinoma | MNDR Database |
| hsa-miR-548b-3p | Her2-receptor positive breast cancer | MNDR Database |
| hsa-miR-548b-3p | hypersensitivity reaction type II disease | MNDR Database |
| hsa-miR-548b-3p | hypertension | MNDR Database |
| hsa-miR-548b-3p | inflammatory bowel disease | MNDR Database |
| hsa-miR-548b-3p | intellectual disability | MNDR Database |
| hsa-miR-548b-3p | intestinal disease | MNDR Database |
| hsa-miR-548b-3p | invasive ductal carcinoma | MNDR Database |
| hsa-miR-548b-3p | kidney disease | MNDR Database |
| hsa-miR-548b-3p | leukemia | MNDR Database |
| hsa-miR-548b-3p | liver disease | MNDR Database |
| hsa-miR-548b-3p | lung adenocarcinoma | MNDR Database |
| hsa-miR-548b-3p | lung cancer | MNDR Database |
| hsa-miR-548b-3p | lung disease | MNDR Database |
| hsa-miR-548b-3p | lung small cell carcinoma | MNDR Database |
| hsa-miR-548b-3p | lung squamous cell carcinoma | MNDR Database |
| hsa-miR-548b-3p | lymphoma | MNDR Database |
| hsa-miR-548b-3p | malignant glioma | MNDR Database |
| hsa-miR-548b-3p | melanoma | MNDR Database |
| hsa-miR-548b-3p | myopathy | MNDR Database |
| hsa-miR-548b-3p | nephroblastoma | MNDR Database |
| hsa-miR-548b-3p | neurodegenerative disease | MNDR Database |
| hsa-miR-548b-3p | oral squamous cell carcinoma | MNDR Database |
| hsa-miR-548b-3p | Ovarian Neoplasms | MNDR Database |
| hsa-miR-548b-3p | pancreatic adenocarcinoma | MNDR Database |
| hsa-miR-548b-3p | pancreatic cancer | MNDR Database |
| hsa-miR-548b-3p | papillary renal cell carcinoma | MNDR Database |
| hsa-miR-548b-3p | Parkinson's disease | MNDR Database |
| hsa-miR-548b-3p | pituitary adenoma | MNDR Database |
| hsa-miR-548b-3p | progesterone-receptor negative breast cancer | MNDR Database |
| hsa-miR-548b-3p | progesterone-receptor positive breast cancer | MNDR Database |
| hsa-miR-548b-3p | Prostatic Neoplasms | MNDR Database |
| hsa-miR-548b-3p | pulmonary tuberculosis | MNDR Database |
| hsa-miR-548b-3p | schizophrenia | MNDR Database |
| hsa-miR-548b-3p | skin disease | MNDR Database |
| hsa-miR-548b-3p | squamous cell carcinoma | MNDR Database |
| hsa-miR-548b-3p | stomach cancer | MNDR Database |
| hsa-miR-548b-3p | thyroid carcinoma | MNDR Database |
| hsa-miR-548b-3p | vascular disease | MNDR Database |