Interaction Profile
Interaction ID
ncRI-40421688
Interaction Molecules
RP11-79E3.3 -- CSTF2
Interaction Level
RNA-Protein
Interaction Class
binding
Data Source
High-throughput data
Tags
Organism
Homo sapiens
Tissue or Cell Type
HepG2
Experiment
eCLIP
Description
eCLIP experiment on HepG2 against CSTF2
Molecule Profile
Alias
-
Class
protein
UniProt id
Description
One of the multiple factors required for polyadenylation and 3'-end cleavage of mammalian pre-mRNAs. This subunit is directly involved in the binding to pre-mRNAs (By similarity).
Reference Information
| Pubmed ID | 22955616 | Journal | Nature |
|---|---|---|---|
| Title | An integrated encyclopedia of DNA elements in the human genome. | ||
| Author | |||
Binding Sites
| Binding Site ID | Location | Conservation Score |
|---|---|---|
| 9598232 | chr4:34026520-34026567 | 0.001617 |
Network View
Disease Annotation
| Molecule | Disease | Data Source |
|---|---|---|
| RP11-79E3.3 | Carcinoma, Non-Small-Cell Lung | MNDR Database |
| RP11-79E3.3 | lymphoma | MNDR Database |
| RP11-79E3.3 | malignant glioma | MNDR Database |
| RP11-79E3.3 | stomach cancer | MNDR Database |
| RP11-79E3.3 | thyroid cancer | MNDR Database |
| RP11-79E3.3 | Urinary Bladder Neoplasms | MNDR Database |
| RP11-79E3.3 | Uterine Cervical Neoplasms | MNDR Database |