Interaction Profile
Interaction ID
ncRI-40109517
Interaction Molecules
RPL22 -- ZC3H7B
Interaction Level
RNA-Protein
Interaction Class
binding
Data Source
High-throughput data
Tags
Organism
Homo sapiens
Tissue or Cell Type
HEK293
Experiment
PAR-CLIP
Description
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts;CLIPseq data were analysed by CLIPdb
Molecule Profile
Reference Information
| Pubmed ID | 22681889 | Journal | Molecular cell |
|---|---|---|---|
| Title | The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. | ||
| Author | Baltz AG, Munschauer M, Schwanhäusser B, Vasile A, Murakawa Y, Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E, Bonneau R, Selbach M, Dieterich C, Landthaler M | ||
Binding Sites
| Binding Site ID | Location | Conservation Score |
|---|---|---|
| 466227 | chr1:6258081-6258101 | 0.0317 |
| 466230 | chr1:6258141-6258161 | 0.0008 |
| 466232 | chr1:6258241-6258261 | 0.00205 |
| 466235 | chr1:6258461-6258501 | 0.006625 |
| 466238 | chr1:6258521-6258541 | 0.00025 |
| 466240 | chr1:6258581-6258601 | 0.00395 |
| 466241 | chr1:6258621-6258641 | 0.00125 |
| 466244 | chr1:6258701-6258721 | 0.00075 |
| 466246 | chr1:6258801-6258841 | 0.000725 |
| 466249 | chr1:6258861-6258881 | 0.02405 |
Network View