Specific Information of Small Protein : SPROMMU90866
General Information
| Small Protein ID | SPROMMU90866 |
| Organism | Mouse (Mus musculus) |
| Small Protein Sequence | MTWVQDQLDDETLFPSKIGVPFPKNFMSVAKTILKRLFRVYAHIYHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKDR* |
| RNA Sequence | ATGACTTGGGTTCAGGATCAGCTTGATGACGAAACTCTTTTTCCTTCTAAGATTGGTGTCCCTTTTCCCAAAAACTTTATGTCTGTGGCAAAGACTATTCTGAAGCGTCTCTTCAGGGTTTATGCCCATATCTACCACCAGCACTTTGACTCCGTGATGCAGCTGCAGGAGGAGGCTCACCTCAACACCTCCTTTAAGCACTTTATTTTCTTTGTTCAGGAGTTTAATCTGATTGATAGGCGTGAGTTGGCACCACTTCAGGAATTAATTGAGAAGCTTGGATCTAAAGACAGATAA |
| Protein Length | 98 |
| Start Codon | ATG |
| Location | chr6:83334154-83340253:+ |
| Blocks | 83334154-83334209,83338280-83338444,83340175-83340253 |
| Mean PhyloCSF | 4.85079124826 |
| Data Source | Ribosome profiling; |
| Related Genes | ENSMUSG00000043131; Mob1a; |
| Mass (Da) | mono. 11731.1; avg. 11738.4 |
Ribosome profiling
| Ribo-seq ID | Ensembl Gene ID | Ensembl Transcript ID | Symbol | Gene Type | TIS Type | Ribo P value | TIS P value | Start On Trans | Stop On Trans | In-frame Count | Ribo-seq RPKM |
|---|
| GSE100048 | ENSMUSG00000043131.14 | ENSMUST00000101245.3 | Mob1a | Protein_coding | Truncated | 0.011849 | None | 523 | 820 | 7 | 302.221213 |
| SRR618774,618775 | ENSMUSG00000043131.14 | ENSMUST00000055261.10 | Mob1a | Protein_coding | Truncated | 6.27E-16 | 0.046849 | 592 | 889 | 148 | 327.985884 |
| GSE100048 | ENSMUSG00000043131.14 | ENSMUST00000055261.10 | Mob1a | Protein_coding | Truncated | 0.011849 | None | 592 | 889 | 7 | 302.221213 |
| Min Ribo P value | 6.27E-16 |
| Min TIS P value | None |
| Ribo-seq ID | Cell or Tissue | Phenotype | Ribo-seq Source Details | PMID |
|---|
| GSE100048 | C57BL/6-CD4+ T cells | WT | GSM2678053; GSM2678054 | 28792938; |
| SRR618774,618775 | MEF | WT | SRR618774; SRR618775 | 22927429; |
Mass Spectrometry Information
Function and Disease
| Functional domain prediction |  |
| Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
|---|
| SMART | SM01388 | | 1 | 86 | 9.6E-20 | T | IPR005301 | MOB kinase activator family | | |
| PANTHER | PTHR22599:SF30 | | 1 | 98 | 4.5E-58 | T | | | | |
| SUPERFAMILY | SSF101152 | | 1 | 93 | 1.01E-41 | T | IPR036703 | MOB kinase activator superfamily | | |
| Pfam | PF03637 | Mob1/phocein family | 1 | 86 | 5.9E-38 | T | IPR005301 | MOB kinase activator family | | |
| PANTHER | PTHR22599 | | 1 | 98 | 4.5E-58 | T | IPR005301 | MOB kinase activator family | | |
| Gene3D | G3DSA:1.20.140.30 | | 1 | 98 | 4.6E-48 | T | IPR036703 | MOB kinase activator superfamily | | |
Related Small Proteins with Different TISs
| SmProt ID | Small Protein Length | Start Codon | Strand | Blocks |
|---|
| SPROMMU4367 | 68 | AAG | + | 83338315-83338444, 83340175-83340253 |
SmProt