Specific Information of Small Protein : SPROMMU4367
General Information
| Small Protein ID | SPROMMU4367 |
| Organism | Mouse (Mus musculus) |
| Small Protein Sequence | KTILKRLFRVYAHIYHQHFDSVMQLQEEAHLNTSFKHFIFFVQEFNLIDRRELAPLQELIEKLGSKDR* |
| RNA Sequence | AAGACTATTCTGAAGCGTCTCTTCAGGGTTTATGCCCATATCTACCACCAGCACTTTGACTCCGTGATGCAGCTGCAGGAGGAGGCTCACCTCAACACCTCCTTTAAGCACTTTATTTTCTTTGTTCAGGAGTTTAATCTGATTGATAGGCGTGAGTTGGCACCACTTCAGGAATTAATTGAGAAGCTTGGATCTAAAGACAGATAA |
| Protein Length | 68 |
| Start Codon | AAG |
| Location | chr6:83338315-83340253:+ |
| Blocks | 83338315-83338444,83340175-83340253 |
| Mean PhyloCSF | 5.06418841386 |
| Data Source | Ribosome profiling; |
| Related Genes | ENSMUSG00000043131; Mob1a; |
| Mass (Da) | mono. 8309.4; avg. 8314.5 |
Ribosome profiling
| Ribo-seq ID | Ensembl Gene ID | Ensembl Transcript ID | Symbol | Gene Type | TIS Type | Ribo P value | TIS P value | Start On Trans | Stop On Trans | In-frame Count | Ribo-seq RPKM |
|---|
| SRR618774,618775 | ENSMUSG00000043131.14 | ENSMUST00000038658.14 | Mob1a | Protein_coding | Truncated | 5.442E-13 | 0.014356 | 390 | 597 | 98 | 311.605861 |
| SRR618774,618775 | ENSMUSG00000043131.14 | ENSMUST00000055261.10 | Mob1a | Protein_coding | Truncated | 5.442E-13 | 0.014356 | 682 | 889 | 98 | 311.605861 |
| Min Ribo P value | 5.442E-13 |
| Min TIS P value | 0.014356 |
| Ribo-seq ID | Cell or Tissue | Phenotype | Ribo-seq Source Details | PMID |
|---|
| SRR618774,618775 | MEF | WT | SRR618774; SRR618775 | 22927429; |
Mass Spectrometry Information
Function and Disease
| Functional domain prediction |  |
| Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
|---|
| PANTHER | PTHR22599 | | 1 | 68 | 4.4E-37 | T | IPR005301 | MOB kinase activator family | | |
| PANTHER | PTHR22599:SF30 | | 1 | 68 | 4.4E-37 | T | | | | |
| Pfam | PF03637 | Mob1/phocein family | 1 | 56 | 1.2E-24 | T | IPR005301 | MOB kinase activator family | | |
| SUPERFAMILY | SSF101152 | | 1 | 63 | 1.05E-26 | T | IPR036703 | MOB kinase activator superfamily | | |
| Gene3D | G3DSA:1.20.140.30 | | 1 | 68 | 8.7E-31 | T | IPR036703 | MOB kinase activator superfamily | | |
| SMART | SM01388 | | 1 | 56 | 1.1E-4 | T | IPR005301 | MOB kinase activator family | | |
Related Small Proteins with Different TISs
| SmProt ID | Small Protein Length | Start Codon | Strand | Blocks |
|---|
| SPROMMU231550 | 94 | TTG | + | 83329990-83330033, 83338280-83338444, 83340175-83340253 |
| SPROMMU90866 | 98 | ATG | + | 83334154-83334209, 83338280-83338444, 83340175-83340253 |
SmProt