Specific Information of Small Protein : SPROMMU63392
General Information
Small Protein ID | SPROMMU63392 |
Organism | Mouse (Mus musculus) |
Small Protein Sequence | IGVNHETYDNSFKIFSNGSCTTTA* |
RNA Sequence | ATAGGTGTGAACCACGAGACATATGACAACTCATTCAAGATTTTCAGCAATGGATCCTGCACAACAACTGCTTAG |
Protein Length | 24 |
Start Codon | ATA |
Location | chr1:11224044-11224119:- |
Blocks | 11224044-11224119 |
Mean PhyloCSF | 0 |
Data Source | Ribosome profiling; |
Related Genes | ENSMUSG00000048960; Prex2; ENSMUSG00000101827; Gm28686; NONMMUG000100; |
Mass (Da) | mono. 2605.2; avg. 2606.8 |
Ribosome profiling
Min Ribo P value | 0.041063 |
Min TIS P value | None |
Ribo-seq ID | Cell or Tissue | Phenotype | Ribo-seq Source Details | PMID |
---|
GSE99585_alt | C57BL/6-Quadriceps muscle | WT | GSM2648077; GSM2648078 | 28615380; |
Mass Spectrometry Information
Function and Disease
Functional domain prediction |       |
Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
---|
No results |
Related Small Proteins with Different TISs
SmProt ID | Small Protein Length | Start Codon | Strand | Blocks |
---|
SPROMMU198074 | 22 | GTG | - | 11224044-11224113 |