Specific Information of Small Protein : SPROMMU63392
General Information
Small Protein IDSPROMMU63392
OrganismMouse (Mus musculus)
Small Protein SequenceIGVNHETYDNSFKIFSNGSCTTTA*
RNA SequenceATAGGTGTGAACCACGAGACATATGACAACTCATTCAAGATTTTCAGCAATGGATCCTGCACAACAACTGCTTAG
Protein Length24
Start CodonATA
Locationchr1:11224044-11224119:-
Blocks11224044-11224119
Mean PhyloCSF0
Data SourceRibosome profiling;
Related GenesENSMUSG00000048960; Prex2; ENSMUSG00000101827; Gm28686; NONMMUG000100;
Mass (Da)mono. 2605.2; avg. 2606.8
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE99585_altENSMUSG00000101827.1ENSMUST00000187404.1Gm28686Processed_pseudogeneNovel0.041063None55130103.20516356
Min Ribo P value0.041063
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE99585_altC57BL/6-Quadriceps muscleWTGSM2648077; GSM264807828615380;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROMMU19807422GTG-11224044-11224113