Specific Information of Small Protein : SPROHSA88936
General Information
Small Protein IDSPROHSA88936
OrganismHuman (Homo sapiens)
Small Protein SequenceRAGFLG*
RNA SequenceAGGGCGGGCTTTCTAGGATGA
Protein Length6
Start CodonAGG
Locationchr3:122359764-122359785:-
Blocks122359764-122359785
Mean PhyloCSF-8.49966655459
Data SourceRibosome profiling;
Related GenesENSG00000160124; CCDC58;
Mass (Da)mono. 619.3; avg. 619.7
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE94613_2_altENSG00000160124.9ENST00000497726.5CCDC58Protein_coding3'UTR0.005848None252273549.5438046
GSE94613_2_altENSG00000160124.9ENST00000460810.1CCDC58Protein_codingNovel0.005848None433454549.5438046
GSE94613_2_altENSG00000160124.9ENST00000291458.9CCDC58Protein_coding3'UTR0.005848None525546549.5438046
GSE94613_2_altENSG00000160124.9ENST00000466854.5CCDC58Protein_codingNovel0.005848None612633549.5438046
Min Ribo P value0.005848
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE94613_2_altMOLM13Acute myeloid leukemiaGSM248105329186125;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
Acute myeloid leukemiaPredicted by Ribo-seq
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA14605011ATG-122359764-122359800