Specific Information of Small Protein : SPROHSA76182
General Information
| Small Protein ID | SPROHSA76182 |
| Organism | Human (Homo sapiens) |
| Small Protein Sequence | RHLKCRISP* |
| RNA Sequence | AGGCATTTAAAGTGTAGAATCTCACCCTGA |
| Protein Length | 9 |
| Start Codon | AGG |
| Location | chr22:50085153-50085183:- |
| Blocks | 50085153-50085183 |
| Mean PhyloCSF | -6.71080002785 |
| Data Source | Ribosome profiling; |
| Related Genes | ENSG00000100427; MLC1; |
| Mass (Da) | mono. 1108.6; avg. 1109.3 |
Ribosome profiling
| Min Ribo P value | 0.001768 |
| Min TIS P value | None |
| Ribo-seq ID | Cell or Tissue | Phenotype | Ribo-seq Source Details | PMID |
|---|
| GSE94613_2_alt | MOLM13 | Acute myeloid leukemia | GSM2481053 | 29186125; |
Mass Spectrometry Information
Function and Disease
| Functional domain prediction |       |
| Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
|---|
| No results |
| Disease | Detected |
|---|
| Acute myeloid leukemia | Predicted by Ribo-seq |
Related Variants
| Variant ID | Consequence to sORF | rsID | Ribo-seq ID |
|---|
| No results |
Related Small Proteins with Different TISs
| SmProt ID | Small Protein Length | Start Codon | Strand | Blocks |
|---|
| SPROHSA154397 | 10 | ATG | - | 50085153-50085186 |