Specific Information of Small Protein : SPROHSA76182
General Information
Small Protein ID | SPROHSA76182 |
Organism | Human (Homo sapiens) |
Small Protein Sequence | RHLKCRISP* |
RNA Sequence | AGGCATTTAAAGTGTAGAATCTCACCCTGA |
Protein Length | 9 |
Start Codon | AGG |
Location | chr22:50085153-50085183:- |
Blocks | 50085153-50085183 |
Mean PhyloCSF | -6.71080002785 |
Data Source | Ribosome profiling; |
Related Genes | ENSG00000100427; MLC1; |
Mass (Da) | mono. 1108.6; avg. 1109.3 |
Ribosome profiling
Min Ribo P value | 0.001768 |
Min TIS P value | None |
Ribo-seq ID | Cell or Tissue | Phenotype | Ribo-seq Source Details | PMID |
---|
GSE94613_2_alt | MOLM13 | Acute myeloid leukemia | GSM2481053 | 29186125; |
Mass Spectrometry Information
Function and Disease
Functional domain prediction |      |
Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
---|
No results |
Disease | Detected |
---|
Acute myeloid leukemia | Predicted by Ribo-seq |
Related Variants
Variant ID | Consequence to sORF | rsID | Ribo-seq ID |
---|
No results |
Related Small Proteins with Different TISs
SmProt ID | Small Protein Length | Start Codon | Strand | Blocks |
---|
SPROHSA154397 | 10 | ATG | - | 50085153-50085186 |