Specific Information of Small Protein : SPROHSA51610
General Information
Small Protein IDSPROHSA51610
OrganismHuman (Homo sapiens)
Small Protein SequenceTLLSPGWSGVWAPRRRRLRRTRRPGRSPFPERTAL*
RNA SequenceACGCTCCTGTCCCCCGGCTGGTCCGGGGTCTGGGCGCCGCGTCGACGGCGGCTCCGCAGGACGCGCAGACCGGGCCGCAGCCCATTCCCCGAGCGGACTGCATTATGA
Protein Length35
Start CodonACG
Locationchr9:76394167-76394275:-
Blocks76394167-76394275
Mean PhyloCSF-7.71998148494
Data SourceRibosome profiling;
Related GenesENSG00000135002; RFK;
Mass (Da)mono. 4141.3; avg. 4143.8
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR5350745_altENSG00000135002.12ENST00000376736.6RFKProtein_coding5'UTR0.037858None151259843.5522333
SRR5350745_altENSG00000135002.12ENST00000472900.5RFKProtein_codingNovel0.037858None242350843.5522333
SRR5350745_altENSG00000135002.12ENST00000479197.1RFKProtein_codingNovel0.037858None242350843.5522333
Min Ribo P value0.037858
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
SRR5350745_altH1933NSCLCGSM253890428388414;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
9-76394190-A-CNon-Synonymous p.F29Crs2490582SRR2818787; SRR2818791; SRR3208885; SRR3208921; SRR3317843; SRR3575897; SRR4045276; SRR4450331; SRR4450332; SRR5047770; SRR5047771; SRR5047772; SRR5227294; SRR5239056; SRR5239057; SRR5350744; SRR5350745; SRR5382423; SRR5382424; SRR5512738; SRR6053333; SRR6053334; SRR6838651; SRR7207252; SRR8907185; SRR8907187; SRR8310197; SRR8310198; SRR8310199; SRR8310200; SRR8310205; SRR6181539; SRR6181540; SRR6181541; SRR3680966; SRR3680967; SRR3680968; SRR3680969; SRR1333393; SRR1333394; SRR627622; SRR627625; SRR627626; SRR627627; SRR810100; SRR810101; SRR810102; SRR810103; SRR810104; SRR1795425; SRR1795426; SRR1795427; SRR1795428; SRR618771
9-76394223-A-GNon-Synonymous p.L18Prs3739729SRR2818787; SRR2818791; SRR4045276; SRR4450331; SRR4450332; SRR5047771; SRR5047772; SRR5239056; SRR5239057; SRR6838651; SRR8310197; SRR6181538; SRR6181539; SRR6181540; SRR6181541; SRR3680966; SRR3680967; SRR3680968; SRR3680969; SRR810101
9-76394227-G-ANon-Synonymous p.R17W.SRR5239056
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA6763616AGG-76394167-76394218