Specific Information of Small Protein : SPROHSA370545
General Information
Small Protein IDSPROHSA370545
OrganismHuman (Homo sapiens)
Small Protein SequenceLRNLDLRSVCEWYSVKRT
RNA SequenceTTGAGAAACCTGGATCTGCGATCTGTTTGTGAGTGGTATTCAGTTAAGAGAACA
Protein Length18
Start CodonTTG
Locationchr14:58285733-58291665:-
Blocks58285733-58285756,58291634-58291665
Mean PhyloCSF-5.14448151765
Data SourceRibosome profiling;
Related GenesENSG00000139971; ARMH4; ENSG00000257621; PSMA3-AS1; ENSG00000279636; AL132989.2; NONHSAG015097;NONHSAG015108;NONHSAG068810;
Mass (Da)mono. 2237.2; avg. 2238.6
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR5047770_altENSG00000257621.8ENST00000551597.6PSMA3-AS1LncRNANovel0.040968None4515051217.6311542
Min Ribo P value0.040968
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
SRR5047770_altiPSC-differentiated dopamine neuronsParkinson DiseaseGSM2402496; GSM2402497; GSM2402498NA;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA20050027ATG-58285733-58285756, 58291634-58291692