Specific Information of Small Protein : SPROHSA370544
General Information
Small Protein IDSPROHSA370544
OrganismHuman (Homo sapiens)
Small Protein SequenceLRNLDLRSVCEVKKKENETYSRFKKEGTSSTIH*
RNA SequenceTTGAGAAACCTGGATCTGCGATCTGTTTGTGAGGTGAAGAAGAAAGAAAATGAAACATACTCAAGATTTAAGAAAGAGGGAACGAGCAGTACCATTCACTGA
Protein Length33
Start CodonTTG
Locationchr14:58288742-58291665:-
Blocks58288742-58288813,58291634-58291665
Mean PhyloCSF-7.9426862913
Data SourceRibosome profiling;
Related GenesENSG00000139971; ARMH4; ENSG00000257621; PSMA3-AS1; ENSG00000279636; AL132989.2; NONHSAG015097;NONHSAG015108;NONHSAG068810;
Mass (Da)mono. 3895; avg. 3897.4
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE105082_altENSG00000257621.8ENST00000555037.1PSMA3-AS1LncRNANovel0.041202None29439642.66489519
Min Ribo P value0.041202
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE105082_altHELACervical cancerGSM2817679; GSM281768030591072;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA20049942ATG-58288742-58288813, 58291634-58291692