Specific Information of Small Protein : SPROHSA337423
General Information
Small Protein IDSPROHSA337423
OrganismHuman (Homo sapiens)
Small Protein SequenceVLSAHARKPGPDAAVRRTSRRVRLNAASCQAARDALSLRRLLAS*
RNA SequenceGTGCTCTCAGCTCATGCCCGGAAACCAGGTCCCGACGCCGCGGTCAGACGGACCTCTAGACGCGTCCGCCTCAATGCCGCCAGCTGCCAGGCCGCCCGTGACGCGTTAAGCCTGCGCCGCCTCCTGGCTTCGTGA
Protein Length44
Start CodonGTG
Locationchr9:122264731-122264866:+
Blocks122264731-122264866
Mean PhyloCSF-5.43404439092
Data SourceRibosome profiling;
Related GenesENSG00000148187; MRRF; ENSG00000119446; RBM18;
Mass (Da)mono. 4736.7; avg. 4739.4
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE83493_altENSG00000148187.18ENST00000297908.7MRRFProtein_coding5'UTR0.023461None12926497.98938434
Min Ribo P value0.023461
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE83493_altHeLa S3Cervical cancerGSM2204389; GSM2204390; GSM2204391; GSM220439228460002;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
9-122264840-A-CNon-Synonymous p.S37Rrs7035313SRR3680969
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA21613756ATG+122264695-122264866