Specific Information of Small Protein : SPROHSA334824
General Information
Small Protein IDSPROHSA334824
OrganismHuman (Homo sapiens)
Small Protein SequenceVRSPADLQLGTGRNARPATAGNKGSGTGSSTLEPTSLSEPPVTGLCLPLDGHVDGAAHPASLVATLPG*
RNA SequenceGTGCGATCGCCTGCGGATCTGCAGCTGGGCACCGGCCGCAACGCCCGCCCCGCGACGGCAGGGAATAAAGGCTCAGGGACCGGCAGTTCTACTCTAGAGCCCACCAGCCTCTCAGAGCCTCCGGTGACTGGCCTGTGTCTCCCCCTGGATGGACATGTGGACGGCGCTGCTCATCCTGCAAGCCTTGTTGCTACCCTCCCTGGCTGA
Protein Length68
Start CodonGTG
Locationchr19:11577258-11578904:-
Blocks11577258-11577317,11577592-11577679,11578843-11578904
Mean PhyloCSF-7.18823187132
Data SourceRibosome profiling;
Related GenesENSG00000198551; ZNF627; ENSG00000102575; ACP5;
Mass (Da)mono. 6596.4; avg. 6600.3
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR5512738_altENSG00000102575.12ENST00000412435.6ACP5Protein_coding5'UTR2.64E-05None822893420.8219425
Min Ribo P value2.64E-05
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
SRR5512738_altGM19147-Lymphoblastoid Cell LineWTGSM260131229950183;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
MobiDBLitemobidb-liteconsensus disorder prediction1838-T
MobiDBLitemobidb-liteconsensus disorder prediction143-T
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
19-11577645-T-CSynonymous p.L32Lrs2071484SRR5047771; SRR5512738; SRR810104
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA34223316GTG-11577258-11577309
SPROHSA5473250ACG-11577258-11577317, 11577592-11577679, 11578843-11578850