Specific Information of Small Protein : SPROHSA268343
General Information
Small Protein IDSPROHSA268343
OrganismHuman (Homo sapiens)
Small Protein SequenceLPGPRGSGARAFGNLRCAKSVRRRGLSPPPLASARERLAWLFQRKQRLSDMNTVTLTTRPT*
RNA SequenceCTGCCAGGACCCAGAGGGAGCGGAGCACGCGCCTTTGGGAATCTTCGGTGCGCCAAGTCTGTTCGCCGCCGGGGTCTATCACCCCCGCCCCTCGCCTCTGCCCGTGAGCGTCTGGCTTGGCTTTTTCAGAGGAAACAGAGACTCTCAGACATGAATACTGTGACACTGACCACCAGGCCAACTTAA
Protein Length61
Start CodonCTG
Locationchr10:95904860-95907888:-
Blocks95904860-95904935,95907777-95907888
Mean PhyloCSF-8.0010967793
Data SourceRibosome profiling;
Related GenesENSG00000226688; ENTPD1-AS1; ENSG00000188649; CC2D2B; ENSG00000270099; AL365273.2; NONHSAG061460;
Mass (Da)mono. 6770.7; avg. 6774.8
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR4045276_altENSG00000226688.7ENST00000661375.1ENTPD1-AS1LncRNANovel3.363E-05None152011114.0067288
GSE94454_altENSG00000226688.7ENST00000661375.1ENTPD1-AS1LncRNANovel0.012356None152014210.0519294
Min Ribo P value3.363E-05
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE94454_altHuh7HepatomaGSM2476003; GSM2476004; GSM247600528323820;
SRR4045276_altMeg01 cellsWTGSM228590927681415;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
10-95907825-G-TNon-Synonymous p.R22Srs41291578SRR1795427; SRR964946; SRR618772; SRR618771; SRR618773
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA14369711ATG-95904860-95904896
SPROHSA29860824CTG-95904860-95904935