Specific Information of Small Protein : SPROHSA209417
General Information
Small Protein IDSPROHSA209417
OrganismHuman (Homo sapiens)
Small Protein SequenceMVPGAGQFSHQSGDW*
RNA SequenceATGGTGCCTGGAGCTGGGCAGTTTTCTCATCAGAGTGGGGACTGGTAA
Protein Length15
Start CodonATG
Locationchr1:778554-778602:-
Blocks778554-778602
Mean PhyloCSF0
Data SourceRibosome profiling;
Related GenesENSG00000230021; AL669831.3; ENSG00000228327; AL669831.1; NONHSAG000046;NONHSAG056042;NONHSAG000041;
Mass (Da)mono. 1602.7; avg. 1603.7
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE58207_altENSG00000228327.3ENST00000506640.2AL669831.1Transcribed_unprocessed_pseudogeneNovel0.0323770.001379247236.43665726
GSE94613_2ENSG00000228327.3ENST00000506640.2AL669831.1Transcribed_unprocessed_pseudogeneNovel0.000653None24721252.0209948
GSE94613_2_altENSG00000228327.3ENST00000506640.2AL669831.1Transcribed_unprocessed_pseudogeneNovel0.000653None24721252.0209948
Min Ribo P value0.000653
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE58207_altHCT116Colorectal carcinomaGSM1403307; GSM140330825510491;
GSE94613_2MOLM13Acute myeloid leukemiaGSM248105329186125;
GSE94613_2_altMOLM13Acute myeloid leukemiaGSM248105329186125;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA33422314GTG-778554-778599