Specific Information of Small Protein : SPROHSA170605
General Information
Small Protein IDSPROHSA170605
OrganismHuman (Homo sapiens)
Small Protein SequenceMPVIPANWEAEAGESLKPGRWRLRIRLILWEN*
RNA SequenceATGCCTGTAATTCCAGCTAATTGGGAGGCTGAGGCAGGAGAATCGCTTAAACCTGGAAGATGGAGGTTGCGAATAAGACTGATTTTATGGGAAAATTAA
Protein Length32
Start CodonATG
Locationchr14:58291679-58293384:-
Blocks58291679-58291707,58293313-58293384
Mean PhyloCSF-2.33649493709
Data SourceRibosome profiling;
Related GenesENSG00000139971; ARMH4; ENSG00000257621; PSMA3-AS1; ENSG00000252782; RNU6-341P; NONHSAG015097;NONHSAG015108;
Mass (Da)mono. 3800; avg. 3802.4
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE105082ENSG00000257621.8ENST00000551597.6PSMA3-AS1LncRNANovel0.033526None338437106.86412398
Min Ribo P value0.033526
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE105082HELACervical cancerGSM2817679; GSM281768030591072;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA2486295ATT-58291679-58291697
SPROHSA2625856CTG-58291679-58291700