Specific Information of Small Protein : SPROHSA152968
General Information
| Small Protein ID | SPROHSA152968 |
| Organism | Human (Homo sapiens) |
| Small Protein Sequence | MSAVEWNKREEIVAEQAIKHLKQHSPLLAAFTTQSQSELTLLLKIQEYCYDNIHFMKAFRKIVVLFIKL* |
| RNA Sequence | ATGAGCGCTGTGGAATGGAACAAAAGAGAGGAGATTGTAGCAGAGCAAGCCATCAAACACTTGAAGCAACACAGCCCTCTACTTGCTGCCTTTACTACTCAAAGTCAGTCTGAGCTGACCCTGTTACTGAAGATTCAGGAGTATTGCTATGACAACATTCATTTCATGAAAGCCTTCCGGAAAATAGTGGTGCTTTTTATAAAGCTGTAG |
| Protein Length | 69 |
| Start Codon | ATG |
| Location | chr3:172425991-172426201:- |
| Blocks | 172425991-172426201 |
| Mean PhyloCSF | -3.11980267266 |
| Data Source | Ribosome profiling; |
| Related Genes | ENSG00000236686; BZW1P1; |
| Mass (Da) | mono. 8128.4; avg. 8133.5 |
Ribosome profiling
| Min Ribo P value | 0.043301 |
| Min TIS P value | None |
| Ribo-seq ID | Cell or Tissue | Phenotype | Ribo-seq Source Details | PMID |
|---|
| SRR3317843 | U2OS cells | WT | GSM2103080 | 27406171; |
Mass Spectrometry Information
Function and Disease
| Functional domain prediction |  |
| Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
|---|
| No results |
| Disease | Detected |
|---|
| No results |
Related Variants
| Variant ID | Consequence to sORF | rsID | Ribo-seq ID |
|---|
| No results |
Related Small Proteins with Different TISs
SmProt