Specific Information of Small Protein : SPROHSA136183
General Information
Small Protein IDSPROHSA136183
OrganismHuman (Homo sapiens)
Small Protein SequenceMKKNNIPEPVVIEIVWSNVMSAVEWNKREEIVAEQAIKHLKQHSPLLAAFTTQSQSELTLLLKIQEYCYDNIHFMKAFRKIVVLFIKL*
RNA SequenceATGAAAAAAAACAACATCCCAGAACCAGTTGTCATCGAAATAGTCTGGTCAAATGTAATGAGCGCTGTGGAATGGAACAAAAGAGAGGAGATTGTAGCAGAGCAAGCCATCAAACACTTGAAGCAACACAGCCCTCTACTTGCTGCCTTTACTACTCAAAGTCAGTCTGAGCTGACCCTGTTACTGAAGATTCAGGAGTATTGCTATGACAACATTCATTTCATGAAAGCCTTCCGGAAAATAGTGGTGCTTTTTATAAAGCTGTAG
Protein Length88
Start CodonATG
Locationchr3:172425991-172426258:-
Blocks172425991-172426258
Mean PhyloCSF-3.12735438846
Data SourceRibosome profiling;
Related GenesENSG00000236686; BZW1P1;
Mass (Da)mono. 10318.6; avg. 10325.1
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE104033ENSG00000236686.1ENST00000454901.1BZW1P1Processed_pseudogeneNovel0.030025None83110981324.6298195
GSE104033_altENSG00000236686.1ENST00000454901.1BZW1P1Processed_pseudogeneNovel0.030025None83110981324.6298195
GSE83493ENSG00000236686.1ENST00000454901.1BZW1P1Processed_pseudogeneNovel0.039241None83110985323.7886163
GSE83493_altENSG00000236686.1ENST00000454901.1BZW1P1Processed_pseudogeneNovel0.039241None83110985323.7886163
Min Ribo P value0.030025
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE104033HAP-1 cellsChronic myeloid leukemiaGSM2788007; GSM278800830143613;
GSE104033_altHAP-1 cellsChronic myeloid leukemiaGSM2788007; GSM278800830143613;
GSE83493HeLa S3Cervical cancerGSM2204389; GSM2204390; GSM2204391; GSM220439228460002;
GSE83493_altHeLa S3Cervical cancerGSM2204389; GSM2204390; GSM2204391; GSM220439228460002;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
SPROHSA23130125ATT-172425991-172426069
SPROHSA1376026AAG-172425991-172426072
SPROHSA15296869ATG-172425991-172426201
SPROHSA2876591AAG-172425991-172426267