NPInter v4.0

Documents functional interactions between noncoding RNAs and biomolecules

Examples: MALAT1, hsa-mir-107, NONHSAG008675, MI0000114, P04637

Search in NPInter database


In most of the NPInter pages, there is a search bar on the top.

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The search bar can be filled in with molecular name or molecular IDs (NONCODE, miRBase, UniProt, circBase).

Browse in NPInter database


In NPInter v4.0, we perfectly updated the browse module.

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User can filter the interactions with interaction class, interaction level, species, data source and tissue through the filter panel on the left.

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After filtering by these attributes, users can also search molecule name in the search bar on the top of the data table.

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Enjoy browsing!

Download data


All interaction data can be freely downloaded from the Download page.

We provide both the whole dataset of NPInter v4.0 and v3.0.

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Disease search


User can search interactions and molecules related to certain disease.

The disease search is on the Function page.

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In this page, users can enter the disease name and search for molecules related to this disease.

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Blast sequence

In NPInter blast module, we support searching by nucleotide sequence. Users can either update a fasta file or fill in the form with the whole sequence in FASTA format.

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There is a result sample

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Users can click the Details button to enter the molecule profile page for corresponding molecule.