Specific Information of Small Protein : SPROMMU37399
General Information
Small Protein IDSPROMMU37399
OrganismMouse (Mus musculus)
Small Protein SequenceRKWRQS*
RNA SequenceAGGAAATGGAGGCAAAGCTGA
Protein Length6
Start CodonAGG
Locationchr1:11186645-11186666:+
Blocks11186645-11186666
Mean PhyloCSF-5.63814292635
Data SourceRibosome profiling;
Related GenesENSMUSG00000048960; Prex2; NONMMUG000100;
Mass (Da)mono. 859.5; avg. 860
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE81283_2_altENSMUSG00000048960.13ENSMUST00000027056.11Prex2Protein_codingInternal0.026316None39083929767.1077930
Min Ribo P value0.026316
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE81283_2_altC57BL/6JRj-kidneyWTGSM214912228622766;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
No results