Specific Information of Small Protein : SPROHSA61601
General Information
Small Protein IDSPROHSA61601
OrganismHuman (Homo sapiens)
Small Protein SequenceTFRTATLKVKTDECTIGRQDSTP*
RNA SequenceACGTTCAGAACGGCAACTCTTAAGGTTAAAACAGATGAATGTACAATTGGCCGCCAAGATTCAACACCTTGA
Protein Length23
Start CodonACG
Locationchr12:110650186-110650258:-
Blocks110650186-110650258
Mean PhyloCSF-7.15320831537
Data SourceRibosome profiling;
Related GenesENSG00000122986; HVCN1;
Mass (Da)mono. 2567.3; avg. 2568.9
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE94613_1_altENSG00000122986.13ENST00000356742.9HVCN1Protein_codingInternal0.031066None141914911080.2283826
GSE94613_1_altENSG00000122986.13ENST00000620084.4HVCN1Protein_codingInternal0.031066None6877591080.2283826
GSE94613_1_altENSG00000122986.13ENST00000439744.6HVCN1Protein_codingInternal0.031066None7818531080.2283826
GSE94613_1_altENSG00000122986.13ENST00000242607.12HVCN1Protein_codingInternal0.031066None8469181080.2283826
GSE94613_1_altENSG00000122986.13ENST00000548312.5HVCN1Protein_codingInternal0.031066None8749461080.2283826
Min Ribo P value0.031066
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE94613_1_altMOLM13Acute myeloid leukemiaGSM248105229186125;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
12-110650222-C-GNon-Synonymous p.E13Q.SRR5239057
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
No results