Specific Information of Small Protein : SPROHSA333175
General Information
Small Protein IDSPROHSA333175
OrganismHuman (Homo sapiens)
Small Protein SequenceVPSICQSTTLQRTGVPERPHPCHSRISHQH*
RNA SequenceGTGCCGAGCATATGCCAAAGCACTACACTACAAAGAACTGGAGTTCCAGAAAGGCCCCACCCCTGCCATTCTAGAATCTCTCATCAGCATTAA
Protein Length30
Start CodonGTG
Locationchr1:11167511-11199344:-
Blocks11167511-11167517,11199257-11199344
Mean PhyloCSF6.90978491947
Data SourceRibosome profiling;
Related GenesENSG00000198793; MTOR; ENSG00000171819; ANGPTL7;
Mass (Da)mono. 3387.7; avg. 3389.8
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR5350740_altENSG00000198793.12ENST00000361445.8MTORProtein_codingInternal0.034639None42434336311.8551368
Min Ribo P value0.034639
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
SRR5350740_altMCF7Breast adenocarcinomaGSM253888428388414;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
No results