Specific Information of Small Protein : SPROHSA295060
General Information
Small Protein IDSPROHSA295060
OrganismHuman (Homo sapiens)
Small Protein SequenceLACQDPEGAEHAPLGIFGAPSLFAAGVYHPRPSPLPVSVSWLGFFRGNRDSQT*
RNA SequenceCTGGCCTGCCAGGACCCAGAGGGAGCGGAGCACGCGCCTTTGGGAATCTTCGGTGCGCCAAGTCTGTTCGCCGCCGGGGTCTATCACCCCCGCCCCTCGCCTCTGCCCGTGAGCGTCAGCTGGCTTGGCTTTTTCAGAGGAAACAGAGACTCTCAGACATGA
Protein Length53
Start CodonCTG
Locationchr10:95904892-95907893:-
Blocks95904892-95904938,95907777-95907893
Mean PhyloCSF-8.31861108026
Data SourceRibosome profiling;
Related GenesENSG00000226688; ENTPD1-AS1; ENSG00000188649; CC2D2B; ENSG00000270099; AL365273.2; NONHSAG061460;
Mass (Da)mono. 5618.8; avg. 5622.2
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE123564_2_altENSG00000226688.7ENST00000669099.1ENTPD1-AS1LncRNANovel0.035663None1017265.30945869
Min Ribo P value0.035663
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE123564_2_altSkin fibroblasts: Hbs1L-deficientFacial dysmorphism, growth restriction and retinal depositsGSM3507223; GSM3507224; GSM3507225; GSM3507228; GSM3507229; GSM350723030707697;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
10-95907825-G-TNon-Synonymous p.F23Lrs41291578SRR1795427; SRR964946; SRR618772; SRR618771; SRR618773
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
No results