Specific Information of Small Protein : SPROHSA233035
General Information
Small Protein IDSPROHSA233035
OrganismHuman (Homo sapiens)
Small Protein SequenceIPPFLQRPTRGTGCERRATCECAQGLWTPAAAS*
RNA SequenceATTCCGCCTTTTCTTCAGCGTCCTACCCGCGGCACTGGCTGCGAGCGCCGGGCCACCTGCGAGTGTGCGCAGGGACTCTGGACACCCGCGGCGGCGAGCTGA
Protein Length33
Start CodonATT
Locationchr5:50441193-50441295:-
Blocks50441193-50441295
Mean PhyloCSF-7.39891181974
Data SourceRibosome profiling;
Related GenesENSG00000170571; EMB; NONHSAG092016;
Mass (Da)mono. 3543.7; avg. 3546
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE94613_1_altENSG00000170571.12ENST00000508934.5EMBProtein_coding5'UTR0.047118None551571479.2845192
Min Ribo P value0.047118
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE94613_1_altMOLM13Acute myeloid leukemiaGSM248105229186125;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
5-50441293-A-CNon-Synonymous p.I1Mrs28528780SRR1795427
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
No results