Specific Information of Small Protein : SPROHSA206636
General Information
Small Protein IDSPROHSA206636
OrganismHuman (Homo sapiens)
Small Protein SequenceMGAIVRRL*
RNA SequenceATGGGTGCTATTGTGAGGCGGTTGTAG
Protein Length8
Start CodonATG
Locationchr4:184649397-184649424:-
Blocks184649397-184649424
Mean PhyloCSF-8.11011120125
Data SourceRibosome profiling; Literature;
Related GenesENSG00000164305; CASP3;
Mass (Da)mono. 914.5; avg. 915.2
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR4045276ENSG00000164305.19ENST00000308394.9CASP3Protein_coding5'UTR0.007179None235013114.034580
SRR4045276_altENSG00000164305.19ENST00000308394.9CASP3Protein_coding5'UTR0.007179None235013114.034580
GSE45833_4ENSG00000164305.19ENST00000308394.9CASP3Protein_coding5'UTR0.00751None235058464.128385
GSE45833_4_altENSG00000164305.19ENST00000308394.9CASP3Protein_coding5'UTR0.00751None235058464.128385
SRR4045276ENSG00000164305.19ENST00000447121.2CASP3Protein_coding5'UTR0.007179None235013114.034580
SRR4045276_altENSG00000164305.19ENST00000447121.2CASP3Protein_coding5'UTR0.007179None235013114.034580
GSE45833_4ENSG00000164305.19ENST00000447121.2CASP3Protein_coding5'UTR0.00751None235058464.128385
GSE45833_4_altENSG00000164305.19ENST00000447121.2CASP3Protein_coding5'UTR0.00751None235058464.128385
SRR4045276ENSG00000164305.19ENST00000517513.5CASP3Protein_coding5'UTR0.007179None235013114.034580
SRR4045276_altENSG00000164305.19ENST00000517513.5CASP3Protein_coding5'UTR0.007179None235013114.034580
GSE45833_4ENSG00000164305.19ENST00000517513.5CASP3Protein_coding5'UTR0.00751None235058464.128385
GSE45833_4_altENSG00000164305.19ENST00000517513.5CASP3Protein_coding5'UTR0.00751None235058464.128385
GSE103308ENSG00000164305.19ENST00000308394.9CASP3Protein_coding5'UTR0.021221None2350123405.222647
GSE103308ENSG00000164305.19ENST00000447121.2CASP3Protein_coding5'UTR0.021221None2350123405.222647
GSE103308ENSG00000164305.19ENST00000517513.5CASP3Protein_coding5'UTR0.021221None2350123405.222647
GSE103308_altENSG00000164305.19ENST00000308394.9CASP3Protein_coding5'UTR0.021221None2350123405.222647
GSE103308_altENSG00000164305.19ENST00000447121.2CASP3Protein_coding5'UTR0.021221None2350123405.222647
GSE103308_altENSG00000164305.19ENST00000517513.5CASP3Protein_coding5'UTR0.021221None2350123405.222647
GSE58207_altENSG00000164305.19ENST00000308394.9CASP3Protein_coding5'UTR0.0096830.0440162350106404.317434
SRR618770,618771,618772,618773_altENSG00000164305.19ENST00000308394.9CASP3Protein_coding5'UTR0.0143559.522E-17235050312.624815
SRR618770,618771,618772,618773_altENSG00000164305.19ENST00000447121.2CASP3Protein_coding5'UTR0.0143552.776E-09235050312.624815
SRR618770,618771,618772,618773_altENSG00000164305.19ENST00000517513.5CASP3Protein_coding5'UTR0.0143552.776E-09235050312.624815
SRR964946_altENSG00000164305.19ENST00000308394.9CASP3Protein_coding5'UTR0.0110470.0128652350NANA
SRR964946_altENSG00000164305.19ENST00000447121.2CASP3Protein_coding5'UTR0.0110470.0462752350NANA
SRR964946_altENSG00000164305.19ENST00000517513.5CASP3Protein_coding5'UTR0.0110470.0265862350NANA
SRR4045276ENSG00000164305.19ENST00000393588.8CASP3Protein_coding5'UTR0.007179None315813114.034580
SRR4045276_altENSG00000164305.19ENST00000393588.8CASP3Protein_coding5'UTR0.007179None315813114.034580
GSE45833_4ENSG00000164305.19ENST00000393588.8CASP3Protein_coding5'UTR0.00751None315858464.128385
GSE45833_4_altENSG00000164305.19ENST00000393588.8CASP3Protein_coding5'UTR0.00751None315858464.128385
GSE103308ENSG00000164305.19ENST00000393588.8CASP3Protein_coding5'UTR0.021221None3158123405.222647
GSE103308_altENSG00000164305.19ENST00000393588.8CASP3Protein_coding5'UTR0.021221None3158123405.222647
SRR618770,618771,618772,618773_altENSG00000164305.19ENST00000393588.8CASP3Protein_coding5'UTR0.0366842.776E-09315849306.372319
SRR964946_altENSG00000164305.19ENST00000393588.8CASP3Protein_coding5'UTR0.0110470.0265863158NANA
SRR4045276ENSG00000164305.19ENST00000523916.5CASP3Protein_coding5'UTR0.007179None8511213114.034580
SRR4045276_altENSG00000164305.19ENST00000523916.5CASP3Protein_coding5'UTR0.007179None8511213114.034580
GSE45833_4ENSG00000164305.19ENST00000523916.5CASP3Protein_coding5'UTR0.00751None8511258464.128385
GSE45833_4_altENSG00000164305.19ENST00000523916.5CASP3Protein_coding5'UTR0.00751None8511258464.128385
GSE103308ENSG00000164305.19ENST00000523916.5CASP3Protein_coding5'UTR0.021221None85112123405.222647
GSE103308_altENSG00000164305.19ENST00000523916.5CASP3Protein_coding5'UTR0.021221None85112123405.222647
GSE58207_altENSG00000164305.19ENST00000523916.5CASP3Protein_coding5'UTR0.0127010.04401685112105400.503118
SRR618770,618771,618772,618773_altENSG00000164305.19ENST00000523916.5CASP3Protein_coding5'UTR0.0366849.522E-178511249306.372319
SRR964946_altENSG00000164305.19ENST00000523916.5CASP3Protein_coding5'UTR0.0110470.01286585112NANA
Min Ribo P value0.007179
Min TIS P value9.522E-17
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE103308RD-muscleWTGSM276024729696588;
GSE103308_altRD-muscleWTGSM276024729696588;
GSE45833_4BJ cellsProliferationGSM104758923594524;
GSE45833_4_altBJ cellsProliferationGSM104758923594524;
GSE58207_altHCT116Colorectal carcinomaGSM1403307; GSM140330825510491;
SRR4045276Meg01 cellsWTGSM228590927681415;
SRR4045276_altMeg01 cellsWTGSM228590927681415;
SRR618770,618771,618772,618773_altHEK293WTSRR618770; SRR618771; SRR618772; SRR618773NA;
SRR964946_altHEK293WTSRR96494622927429;

Database information
No results
Literature information
PMID26687005;
Cell lines Or TissuesBJ
PhenotypeNULL
Gene IDENSG00000164305
Transcript IDENST00000523916
SymbolCASP3
ORF TypesORF
Gene Typeprotein_coding
ThroughputHigh-throughput Literature Mining
InteractionNA
Function DescriptionNA
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
4-184649399-T-CStop Loss p.*9Wrs113420705SRR3208885; SRR3208921; SRR5227294; SRR6181541; SRR627625; SRR810100
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
No results