SmProt

Specific Information of Small Protein : SPROHSA174447

General Information

Small Protein ID	SPROHSA174447
Organism	Human (Homo sapiens)
Small Protein Sequence	MLQFEKPGSAICLWIQLLDLSTLPVYVPFLFHYERTDCIAHLSGFL*
RNA Sequence	ATGCTCCAGTTTGAGAAACCTGGATCTGCGATCTGTTTGTGGATTCAATTACTGGACTTGTCAACTCTGCCAGTGTACGTGCCATTTCTCTTCCACTATGAGAGGACCGATTGTATTGCACATTTGTCTGGCTTTCTGTAG
Protein Length	46
Start Codon	ATG
Location	chr14:58139314-58291675:-
Blocks	58139314-58139414,58291634-58291675
Mean PhyloCSF	-6.37112765447
Data Source	Ribosome profiling;
Related Genes	ENSG00000139971; ARMH4; ENSG00000243023; UBA52P3; ENSG00000243700; RN7SL598P; ENSG00000258519; AL121579.1; ENSG00000131966; ACTR10; ENSG00000100567; PSMA3; ENSG00000258682; AL132989.1; ENSG00000257621; PSMA3-AS1; ENSG00000180189; HMGB1P14; ENSG00000279636; AL132989.2; NONHSAG015098;NONHSAG015099;NONHSAG015100;NONHSAG015097;NONHSAG015102;NONHSAG015106;NONHSAG015108;NONHSAG068810;NONHSAG107498;
Mass (Da)	mono. 5323.7; avg. 5327.2

Ribosome profiling

Ribo-seq ID	Ensembl Gene ID	Ensembl Transcript ID	Symbol	Gene Type	TIS Type	Ribo P value	TIS P value	Start On Trans	Stop On Trans	In-frame Count	Ribo-seq RPKM
SRR5047771	ENSG00000139971.15	ENST00000554218.1	ARMH4	Protein_coding	Novel	0.014894	None	217	358	52	16.8657775

Min Ribo P value	0.014894
Min TIS P value	None

Ribo-seq ID	Cell or Tissue	Phenotype	Ribo-seq Source Details	PMID
SRR5047771	iPSC-differentiated dopamine neurons	Parkinson Disease	NA	NA;

Database information

No results

Literature information

No results

Mass Spectrometry Information

No results

Function and Disease

Functional domain prediction

Analysis	Signature Accession	Signature Description	Start location	Stop location	Score	Status of the match	InterPro accession	InterPro description	GO	Pathways
No results

Disease	Detected
No results

Related Variants

Variant ID	Consequence to sORF	rsID	Ribo-seq ID
No results

Related Small Proteins with Different TISs

SmProt ID	Small Protein Length	Start Codon	Strand	Blocks
No results