Specific Information of Small Protein : SPROHSA152846
General Information
Small Protein IDSPROHSA152846
OrganismHuman (Homo sapiens)
Small Protein SequenceMSDTHKHRTTQPVPGAQ*
RNA SequenceATGAGCGACACACACAAACACAGAACCACACAGCCAGTCCCAGGAGCCCAGTAA
Protein Length17
Start CodonATG
LocationchrX:52515526-52516666:-
Blocks52515526-52515573,52516659-52516666
Mean PhyloCSF-3.57625925099
Data SourceRibosome profiling;
Related GenesENSG00000204382; XAGE1B;
Mass (Da)mono. 1889.9; avg. 1891.1
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR4045276ENSG00000204382.11ENST00000375612.8XAGE1BProtein_codingNovel0.035937None34640033144.736198
SRR4045276_altENSG00000204382.11ENST00000375612.8XAGE1BProtein_codingNovel0.035937None34640033144.736198
GSE94613_2ENSG00000204382.11ENST00000375612.8XAGE1BProtein_codingNovel0.002908None34640032123.309024
GSE94613_2_altENSG00000204382.11ENST00000375612.8XAGE1BProtein_codingNovel0.002908None34640032123.309024
GSE94613_1ENSG00000204382.11ENST00000375612.8XAGE1BProtein_codingNovel0.031394None34640013139.062529
GSE94613_1_altENSG00000204382.11ENST00000375612.8XAGE1BProtein_codingNovel0.031394None34640013139.062529
Min Ribo P value0.002908
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE94613_1MOLM13Acute myeloid leukemiaGSM248105229186125;
GSE94613_1_altMOLM13Acute myeloid leukemiaGSM248105229186125;
GSE94613_2MOLM13Acute myeloid leukemiaGSM248105329186125;
GSE94613_2_altMOLM13Acute myeloid leukemiaGSM248105329186125;
SRR4045276Meg01 cellsWTGSM228590927681415;
SRR4045276_altMeg01 cellsWTGSM228590927681415;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
Acute myeloid leukemiaPredicted by Ribo-seq
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
No results