Specific Information of Small Protein : SPROHSA145931
General Information
Small Protein IDSPROHSA145931
OrganismHuman (Homo sapiens)
Small Protein SequenceMTDSSARTEALSILYPAVRYWRRKTFNKYLLNDEYALGVVKKNGTFFL*
RNA SequenceATGACAGACagctctgcaagaacggaggccctgtctattttgtacccagctgtacggtactggcgccgaaagacgttcaataaatacttattgaatgacgaatACGCGTTAGGAGTTGTTAAAAAAAATGGAACCTTTTTCCTGTGA
Protein Length48
Start CodonATG
Locationchr2:174396175-174398303:+
Blocks174396175-174396293,174398274-174398303
Mean PhyloCSF-7.10986393325
Data SourceRibosome profiling;
Related GenesENSG00000144306; SCRN3; NONHSAG077962;
Mass (Da)mono. 5645; avg. 5648.5
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE94613_2ENSG00000144306.14ENST00000435964.1SCRN3Protein_coding5'UTR0.015893None42457179.90876092
GSE94613_2_altENSG00000144306.14ENST00000435964.1SCRN3Protein_coding5'UTR0.015893None42457179.90876092
Min Ribo P value0.015893
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE94613_2MOLM13Acute myeloid leukemiaGSM248105329186125;
GSE94613_2_altMOLM13Acute myeloid leukemiaGSM248105329186125;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
2-174396181-A-TSynonymous p.T2Trs79355383SRR5239057; SRR5239058
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
No results