Small Protein ID | SPROHSA145298 | ||
Organism | human (Homo sapiens) | ||
Small Protein Sequence | MTTCS* | ||
RNA Sequence | ATGACAACATGCAGCTGA | ||
Protein Length | 5 | ||
Start Codon | ATG | ||
Location | chr6:136784247-136784265:+ | ||
Blocks | 136784247-136784265 | ||
Mean PhyloCSF | -7.88516660531 | ||
Data Source | Ribosome profiling; | ||
Related Genes | ENSG00000197442; MAP3K5; ENSG00000286646; AL121933.1; NONHSAG093642; |
RiboID | GeneID | TransID | Symbol | GeneType | TISType | RiboPvalue | TISPvalue | StartOnTrans | StopOnTrans |
---|---|---|---|---|---|---|---|---|---|
GSE94613_1 | ENSG00000286646.1 | ENST00000661159.1 | AL121933.1 | lncRNA | Novel | 0.007488 | None | 203 | 221 |
GSE94613_1_alt | ENSG00000286646.1 | ENST00000661159.1 | AL121933.1 | lncRNA | Novel | 0.007488 | None | 203 | 221 |
Min Ribo Pvalue | 0.007488 |
Min TIS Pvalue | None |
No results |
No results |
No results |
Analysis | Signature Accession | Signature Description | Start location | Stop location | Score | Status of the match | InterPro accession | InterPro description | GO | Pathways |
---|---|---|---|---|---|---|---|---|---|---|
No results |
Disease | Detected |
---|---|
acute myeloid leukemia | PredictedByRibo |
VarID | Consequence To sORF | rsID | RiboID |
---|---|---|---|
6-136784262-C-T | Synonymous p.S5S | rs9483947 | SRR5239050;SRR5239051;SRR5239052;SRR5239056;SRR5239057;SRR5239058 |
ID | Small Protein Length | Start Codon | Strand | Blocks |
---|---|---|---|---|
No results |
PMID | 29186125 |
Title | Promoter-bound METTL3 maintains myeloid leukaemia by m 6 A-dependent translation control |
Journal | Nature.2017 Dec 7;552(7683):126-131.doi: 10.1038/nature24678.Epub 2017 Nov 27. |
Authors | Isaia Barbieri,Konstantinos Tzelepis,Luca Pandolfini,Junwei Shi,Gonzalo Millán-Zambrano,Samuel C Robson,Demetrios Aspris,Valentina Migliori,Andrew J Bannister,Namshik Han,Etienne De Braekeleer,Hannes Ponstingl,Alan Hendrick,Christopher R Vakoc,George S Vassiliou,Tony Kouzarides |