Specific Information of Small Protein : SPROHSA141390
General Information
Small Protein IDSPROHSA141390
OrganismHuman (Homo sapiens)
Small Protein SequenceMKQHARPGTSPAPASGLEGQGRGPGGRRGLWSSPSARVVARNGDRARARSLLPAPPRPRVFLPRDSERPLLQARLAAGR*
RNA SequenceATGAAGCAACATGCTAGGCCCGGGACAAGTCCGGCTCCGGCCTCGGGTCTGGAGGGACAAGGCCGGGGGCCGGGTGGCAGACGGGGCCTCTGGTCTTCCCCCAGCGCGAGGGTCGTGGCGCGAAACGGGGACAGGGCGCGCGCTCGGAGCCTCCTCCCCGCCCCGCCCCGCCCAAGGGTCTTCCTCCCCCGGGATTCAGAGCGGCCCCTCCTCCAGGCCAGGCTCGCCGCGGGGCGCTGA
Protein Length79
Start CodonATG
Locationchr1:244970112-244970352:+
Blocks244970112-244970352
Mean PhyloCSF-5.51705959544
Data SourceRibosome profiling;
Related GenesENSG00000203666; EFCAB2; ENSG00000272195; AL356512.1; NONHSAG105240;NONHSAG004873;
Mass (Da)mono. 8406.6; avg. 8411.5
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE94613_2ENSG00000203666.12ENST00000366522.6EFCAB2Protein_coding5'UTR0.007116None1313711513.0052487
GSE94613_2_altENSG00000203666.12ENST00000366522.6EFCAB2Protein_coding5'UTR0.007116None1313711513.0052487
Min Ribo P value0.007116
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE94613_2MOLM13Acute myeloid leukemiaGSM248105329186125;
GSE94613_2_altMOLM13Acute myeloid leukemiaGSM248105329186125;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
MobiDBLitemobidb-liteconsensus disorder prediction167-T
DiseaseDetected
Acute myeloid leukemiaPredicted by Ribo-seq
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
No results