Specific Information of Small Protein : SPROHSA136202
General Information
Small Protein IDSPROHSA136202
OrganismHuman (Homo sapiens)
Small Protein SequenceMKKPRVQT*
RNA SequenceATGAAAAAACCGAGGGTACAAACCTGA
Protein Length8
Start CodonATG
Locationchr1:214614838-214614865:+
Blocks214614838-214614865
Mean PhyloCSF-8.29966656367
Data SourceRibosome profiling;
Related GenesENSG00000117724; CENPF;
Mass (Da)mono. 986.6; avg. 987.2
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE81802_altENSG00000117724.13ENST00000366955.8CENPFProtein_codingInternal0.0287180.01816337364NANA
GSE81802_altENSG00000117724.13ENST00000464322.5CENPFProtein_codingNovel0.0287180.011828337364NANA
Min Ribo P value0.028718
Min TIS P value0.011828
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE81802_altCD19+ B cellsWTGSM217573729529302;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
No results