Specific Information of Small Protein : SPROHSA136201
General Information
Small Protein IDSPROHSA136201
OrganismHuman (Homo sapiens)
Small Protein SequenceMKKIFLKLHILQEKNHKCFSVLPEYMI*
RNA SequenceATGAAAAAAATTTTCTTAAAGCTGCATATACTCCAAGAAAAAAACCACAAATGTTTTTCTGTTTTGCCTGAATACATGATTTAA
Protein Length27
Start CodonATG
Locationchr22:50372046-50372130:+
Blocks50372046-50372130
Mean PhyloCSF-8.08353573935
Data SourceRibosome profiling;
Related GenesENSG00000100239; PPP6R2;
Mass (Da)mono. 3329.8; avg. 3332.1
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
GSE123564_1_altENSG00000100239.16ENST00000395744.7PPP6R2Protein_coding5'UTR0.034381None247331921.3635706
GSE123564_1ENSG00000100239.16ENST00000395744.7PPP6R2Protein_coding5'UTR0.034381None247331921.3635706
GSE123564_1_altENSG00000100239.16ENST00000612753.5PPP6R2Protein_coding5'UTR0.034381None251335921.3635706
GSE123564_1ENSG00000100239.16ENST00000612753.5PPP6R2Protein_coding5'UTR0.034381None251335921.3635706
GSE123564_1_altENSG00000100239.16ENST00000395741.7PPP6R2Protein_coding5'UTR0.034381None255339921.3635706
GSE123564_1ENSG00000100239.16ENST00000395741.7PPP6R2Protein_coding5'UTR0.034381None255339921.3635706
GSE123564_1_altENSG00000100239.16ENST00000359139.7PPP6R2Protein_coding5'UTR0.034381None274358921.3635706
GSE123564_1ENSG00000100239.16ENST00000359139.7PPP6R2Protein_coding5'UTR0.034381None274358921.3635706
Min Ribo P value0.034381
Min TIS P valueNone
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
GSE123564_1Skin fibroblastsWTGSM3507221; GSM3507222; GSM3507226; GSM350722730707697;
GSE123564_1_altSkin fibroblastsWTGSM3507221; GSM3507222; GSM3507226; GSM350722730707697;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
No results