Specific Information of Small Protein : SPROHSA136190
General Information
Small Protein IDSPROHSA136190
OrganismHuman (Homo sapiens)
Small Protein SequenceMKKTHLGEKF*
RNA SequenceATGAAAAAAACGCACCTTGGAGAAAAATTTTAA
Protein Length10
Start CodonATG
Locationchr11:93738116-93738149:-
Blocks93738116-93738149
Mean PhyloCSF-7.06584849502
Data SourceRibosome profiling;
Related GenesENSG00000166012; TAF1D; NONHSAG009374;
Mass (Da)mono. 1217.7; avg. 1218.5
Ribosome profiling
Ribo-seq IDEnsembl Gene IDEnsembl Transcript IDSymbolGene TypeTIS TypeRibo P valueTIS P valueStart On TransStop On TransIn-frame CountRibo-seq RPKM
SRR618770,618771,618772,618773_altENSG00000166012.16ENST00000448108.6TAF1DProtein_codingInternal0.0265230.00172610691102735.8097515
SRR964946_altENSG00000166012.16ENST00000448108.6TAF1DProtein_codingInternal0.0302420.03032510691102NANA
SRR618770,618771,618772,618773_altENSG00000166012.16ENST00000527068.1TAF1DProtein_codingNovel0.0265230.000243143176735.8097515
SRR964946_altENSG00000166012.16ENST00000527068.1TAF1DProtein_codingNovel0.0302420.015833143176NANA
SRR618770,618771,618772,618773_altENSG00000166012.16ENST00000532455.1TAF1DProtein_coding3'UTR0.0265230.007778524557735.8097515
SRR618770,618771,618772,618773_altENSG00000166012.16ENST00000534770.1TAF1DProtein_coding3'UTR0.0265230.007778545578735.8097515
SRR618770,618771,618772,618773_altENSG00000166012.16ENST00000527169.5TAF1DProtein_codingInternal0.0265230.007778603636735.8097515
SRR964946_altENSG00000166012.16ENST00000527169.5TAF1DProtein_codingInternal0.0302420.030325603636NANA
SRR618770,618771,618772,618773_altENSG00000166012.16ENST00000526015.5TAF1DProtein_codingInternal0.0265230.001726617650735.8097515
SRR964946_altENSG00000166012.16ENST00000526015.5TAF1DProtein_codingInternal0.0302420.030325617650NANA
SRR618770,618771,618772,618773_altENSG00000166012.16ENST00000323981.6TAF1DProtein_codingInternal0.0265230.001726618651735.8097515
SRR964946_altENSG00000166012.16ENST00000323981.6TAF1DProtein_codingInternal0.0302420.030325618651NANA
Min Ribo P value0.026523
Min TIS P value0.000243
Ribo-seq IDCell or TissuePhenotypeRibo-seq Source DetailsPMID
SRR618770,618771,618772,618773_altHEK293WTSRR618770; SRR618771; SRR618772; SRR618773NA;
SRR964946_altHEK293WTSRR96494622927429;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
Variant IDConsequence to sORFrsIDRibo-seq ID
No results
Related Small Proteins with Different TISs
SmProt IDSmall Protein LengthStart CodonStrandBlocks
No results