SmProt

Specific Information of Small Protein : SPROHSA136189

General Information

Small Protein ID	SPROHSA136189
Organism	Human (Homo sapiens)
Small Protein Sequence	MKKTFLLTVNGNVSIHPTKSQL*
RNA Sequence	ATGAAAAAAACCTTCCTCTTGACGGTAAACGGCAACGTTTCCATTCACCCCACCAAGAGCCAACTGTAG
Protein Length	22
Start Codon	ATG
Location	chr5:79623262-79623331:+
Blocks	79623262-79623331
Mean PhyloCSF	-7.08247825374
Data Source	Ribosome profiling;
Related Genes	ENSG00000164329; TENT2; NONHSAG040825;
Mass (Da)	mono. 2455.4; avg. 2456.9

Ribosome profiling

Ribo-seq ID	Ensembl Gene ID	Ensembl Transcript ID	Symbol	Gene Type	TIS Type	Ribo P value	TIS P value	Start On Trans	Stop On Trans	In-frame Count	Ribo-seq RPKM
GSE123564_2	ENSG00000164329.13	ENST00000505571.5	TENT2	Protein_coding	Novel	0.049432	None	395	464	16	33.2418283
GSE123564_2_alt	ENSG00000164329.13	ENST00000505571.5	TENT2	Protein_coding	Novel	0.049432	None	395	464	16	33.2418283
GSE123564_2	ENSG00000164329.13	ENST00000296783.7	TENT2	Protein_coding	Internal	0.049432	None	537	606	16	33.2418283
GSE123564_2_alt	ENSG00000164329.13	ENST00000296783.7	TENT2	Protein_coding	Internal	0.049432	None	537	606	16	33.2418283
GSE123564_2	ENSG00000164329.13	ENST00000423041.6	TENT2	Protein_coding	Internal	0.049432	None	643	712	16	33.2418283
GSE123564_2_alt	ENSG00000164329.13	ENST00000423041.6	TENT2	Protein_coding	Internal	0.049432	None	643	712	16	33.2418283
GSE123564_2	ENSG00000164329.13	ENST00000428308.6	TENT2	Protein_coding	Internal	0.049432	None	680	749	16	33.2418283
GSE123564_2_alt	ENSG00000164329.13	ENST00000428308.6	TENT2	Protein_coding	Internal	0.049432	None	680	749	16	33.2418283
GSE123564_2	ENSG00000164329.13	ENST00000504233.5	TENT2	Protein_coding	Internal	0.049432	None	916	985	16	33.2418283
GSE123564_2_alt	ENSG00000164329.13	ENST00000504233.5	TENT2	Protein_coding	Internal	0.049432	None	916	985	16	33.2418283
GSE123564_2	ENSG00000164329.13	ENST00000453514.5	TENT2	Protein_coding	Internal	0.049432	None	931	1000	16	33.2418283
GSE123564_2_alt	ENSG00000164329.13	ENST00000453514.5	TENT2	Protein_coding	Internal	0.049432	None	931	1000	16	33.2418283

Min Ribo P value	0.049432
Min TIS P value	None

Ribo-seq ID	Cell or Tissue	Phenotype	Ribo-seq Source Details	PMID
GSE123564_2	Skin fibroblasts: Hbs1L-deficient	Facial dysmorphism, growth restriction and retinal deposits	GSM3507223; GSM3507224; GSM3507225; GSM3507228; GSM3507229; GSM3507230	30707697;
GSE123564_2_alt	Skin fibroblasts: Hbs1L-deficient	Facial dysmorphism, growth restriction and retinal deposits	GSM3507223; GSM3507224; GSM3507225; GSM3507228; GSM3507229; GSM3507230	30707697;

Database information

No results

Literature information

No results

Mass Spectrometry Information

No results

Function and Disease

Functional domain prediction

Analysis	Signature Accession	Signature Description	Start location	Stop location	Score	Status of the match	InterPro accession	InterPro description	GO	Pathways
No results

Disease	Detected
No results

Related Variants

Variant ID	Consequence to sORF	rsID	Ribo-seq ID
No results

Related Small Proteins with Different TISs

SmProt ID	Small Protein Length	Start Codon	Strand	Blocks
No results