Specific Information of Small Protein : SPROHSA136182
General Information
Small Protein IDSPROHSA136182
Organismhuman (Homo sapiens)
Small Protein SequenceMKKKKKKSLRSLQFQFLFHSVSQTPTHHSLENGKKKQKKNKKMYNGCIEIICNCINGATVIKLNN*
RNA SequenceATGaaaaaaaaaaaaaaaaaaaGTCTGCGTTCATTGCAGTTCCAGTTTCTCTTCCATTCTGTGTCACAGACACCAACACACCACTCATTGGAAAATGGaaaaaaaaaacaaaaaaaaaacaaaaaaaTGTACAATGGATGCATTGAAATTATATGTAATTGTATAAATGGTGCAACAGTAATAAAGTTAAACAATTAA
Protein Length65
Start CodonATG
Locationchr5:17276630-17276828:+
Blocks17276630-17276828
Mean PhyloCSF-4.80074241227
Data SourceRibosome profiling;
Related GenesENSG00000176788; BASP1;
Ribosome profiling
RiboIDGeneIDTransIDSymbolGeneTypeTISTypeRiboPvalueTISPvalueStartOnTransStopOnTrans
SRR5047772ENSG00000176788.9ENST00000616743.1BASP1protein_coding3'UTR0.027392None14981696
SRR5047772ENSG00000176788.9ENST00000322611.4BASP1protein_coding3'UTR0.027392None16031801
Min Ribo Pvalue0.027392
Min TIS PvalueNone
RiboIDCellORTissuePhenotypeRiboSourcePMID
SRR5047772iPSC-differentiated dopamine neuronsParkinson DiseaseNANA;

Database information
No results
Literature information
No results
Mass Spectrometry Information
No results
Function and Disease
Functional domain prediction Funtion   
AnalysisSignature AccessionSignature DescriptionStart locationStop locationScoreStatus of the matchInterPro accessionInterPro descriptionGOPathways
No results
DiseaseDetected
No results
Related Variants
VarIDConsequence To sORFrsIDRiboID
No results
Related Small Proteins with Different TISs
IDSmall Protein LengthStart CodonStrandBlocks
No results
References
No results