InterID NcRNAName NcRNAID NcRNAType PartnerName PartnerID PartnerType Description Experiment Organism PubMedID TissueOrCellLine DataSource ncRI-40077231 SHC1 NONHSAG003036 lncRNA hnRNPL P14866 protein Binding profile from resting CD4 combined CLIP-seq experiments, this sample represents 3 CD4 resting samples CLIP-Seq Homo sapiens 24164894 CD4+ T High-throughput data ncRI-40077232 SHC1 NONHSAG003036 lncRNA AGO2 Q8CJG0 protein Original Ago HITS-CLIP data of BC-3 and BCBL-1 cell lines HITS-CLIP Homo sapiens 25648438 BCBL1Rta; BC3 High-throughput data ncRI-40077233 SHC1 NONHSAG003036 lncRNA WDR33 Q9C0J8 protein PAR-CLIP showed that WDR33 binds in and very close to the AAUAAA signal PAR-CLIP Homo sapiens 25301781 HEK293 High-throughput data ncRI-40146824 SHC1 NONHSAG003036 lncRNA MOV10 P22626 protein we demonstrate that MOV10 has an ATP-dependent 5 to 3 in vitro RNA unwinding activity and determine the RNA-binding sites of MOV10 and its helicase mutants using PAR-CLIP. PAR-CLIP Homo sapiens 24726324 HEK293 High-throughput data ncRI-40155956 SHC1 NONHSAG003036 lncRNA UPF1 Q92900 protein PAR-CLIP of UPF1 reveals that MOV10 and UPF1 bind to RNA in close proximity. PAR-CLIP Homo sapiens 24726324 HEK293 High-throughput data ncRI-40167214 SHC1 NONHSAG003036 lncRNA hnRNPA2B1 O88569 protein Nuclear HNRNPA2B1 HITS-CLIP. HITS-CLIP Homo sapiens MDA-MB-231 High-throughput data ncRI-40194662 SHC1 NONHSAG003036 lncRNA FUS P35637 protein CLIP of Fus/Tls in adult human brain. CLIP-Seq Homo sapiens 23023293 human brain High-throughput data ncRI-40308044 SHC1 NONHSAG003036 lncRNA hsa-miR-214-5p MI0000290 miRNA interactions between ncRNAs and miRNAs Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset Homo sapiens miRanda with Ago CLIP data ncRI-40343872 SHC1 NONHSAG003036 lncRNA hsa-miR-6835-3p MI0022680 miRNA interactions between ncRNAs and miRNAs Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset Homo sapiens miRanda with Ago CLIP data ncRI-40359944 SHC1 NONHSAG003036 lncRNA hsa-miR-1197 MI0006656 miRNA interactions between ncRNAs and miRNAs Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset Homo sapiens TargetScan with Ago CLIP data ncRI-40394588 SHC1 NONHSAG003036 lncRNA hsa-miR-425-5p MI0001448 miRNA interactions between ncRNAs and miRNAs Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset Homo sapiens TargetScan with Ago CLIP data