InterID	NcRNAName	NcRNAID	NcRNAType	PartnerName	PartnerID	PartnerType	Description	Experiment	Organism	PubMedID	TissueOrCellLine	DataSource
ncRI-40013621	BTF3L4	NONHSAG001470	lncRNA	hnRNPL	P14866	protein	Binding profile from resting CD4 combined CLIP-seq experiments, this sample represents 3 CD4 resting samples	CLIP-Seq	Homo sapiens	24164894	CD4+ T; Jurkat; JSL1	High-throughput data
ncRI-40013622	BTF3L4	NONHSAG001470	lncRNA	ADAR	P55265	protein	Genomic analysis of ADAR1 binding	CLIP-Seq	Homo sapiens	25751603	U87MG	High-throughput data
ncRI-40013623	BTF3L4	NONHSAG001470	lncRNA	WDR33	Q9C0J8	protein	PAR-CLIP showed that WDR33 binds in and very close to the AAUAAA signal	PAR-CLIP	Homo sapiens	25301781	HEK293	High-throughput data
ncRI-40089063	BTF3L4	NONHSAG001470	lncRNA	HNRNPF	P52597	protein	Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins;CLIPseq data were analysed by CLIPdb	CLIP-Seq	Homo sapiens	22574288	HEK293T	High-throughput data
ncRI-40091992	BTF3L4	NONHSAG001470	lncRNA	CPSF7	Q8N684	protein	We performed PAR-CLIP experiments for 3' end processing factors;CLIPseq data were analysed by CLIPdb	PAR-CLIP	Homo sapiens	22813749	HEK293	High-throughput data
ncRI-40100928	BTF3L4	NONHSAG001470	lncRNA	CSTF2	P33240	protein	We performed PAR-CLIP experiments for 3' end processing factors;CLIPseq data were analysed by CLIPdb	PAR-CLIP	Homo sapiens	22813749	HEK293	High-throughput data
ncRI-40118422	BTF3L4	NONHSAG001470	lncRNA	hnRNPC	P07910	protein	Quantitative iCLIP reveals genome-wide competition of hnRNP C and U2AF65;CLIPseq data were analysed by CLIPdb	iCLIP	Homo sapiens	23374342	HeLa	High-throughput data
ncRI-40121214	BTF3L4	NONHSAG001470	lncRNA	TDP-43	-	protein	CLIP-Seq of human brain and neuroblastoma sample to characterisethe RNA targets and position-dependent splicing regulation by TDP-43;CLIPseq data were analysed by CLIPdb	iCLIP	Homo sapiens	21358640	SH-SY5Y	High-throughput data
ncRI-40122579	BTF3L4	NONHSAG001470	lncRNA	TARBP2	Q15633	protein	Identify TARBP2 binding sites on endogenous RNA.	HITS-CLIP	Homo sapiens	25043050	MDA-LM2	High-throughput data
ncRI-40137641	BTF3L4	NONHSAG001470	lncRNA	RBM10	P98175	protein	CLIP-Seq analysis of RBM5, RBM6 and RBM10, with 2 biological replicates and one non-specific control for each protein.	CLIP-Seq	Homo sapiens	24332178	HeLa	High-throughput data
ncRI-40146523	BTF3L4	NONHSAG001470	lncRNA	MOV10	P22626	protein	we demonstrate that MOV10 has an ATP-dependent 5 to 3 in vitro RNA unwinding activity and determine the RNA-binding sites of MOV10 and its helicase mutants using PAR-CLIP.	PAR-CLIP	Homo sapiens	24726324	HEK293	High-throughput data
ncRI-40166419	BTF3L4	NONHSAG001470	lncRNA	hnRNPA2B1	O88569	protein	Nuclear HNRNPA2B1 HITS-CLIP.	HITS-CLIP	Homo sapiens		MDA-MB-231	High-throughput data
ncRI-40193872	BTF3L4	NONHSAG001470	lncRNA	FUS	P35637	protein	CLIP of Fus/Tls in adult human brain.	CLIP-Seq	Homo sapiens	23023293	human brain	High-throughput data
ncRI-40303095	BTF3L4	NONHSAG001470	lncRNA	hsa-mir-194-2	MI0000488	miRNA	interactions between ncRNAs and miRNAs	Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset	Homo sapiens			TargetScan with Ago CLIP data
ncRI-40326757	BTF3L4	NONHSAG001470	lncRNA	hsa-miR-378c	MI0015825	miRNA	interactions between ncRNAs and miRNAs	Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset	Homo sapiens			miRanda with Ago CLIP data
ncRI-40327396	BTF3L4	NONHSAG001470	lncRNA	hsa-miR-378h	MI0016808	miRNA	interactions between ncRNAs and miRNAs	Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset	Homo sapiens			miRanda with Ago CLIP data
ncRI-40327550	BTF3L4	NONHSAG001470	lncRNA	hsa-miR-378i	MI0016902	miRNA	interactions between ncRNAs and miRNAs	Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset	Homo sapiens			miRanda with Ago CLIP data
ncRI-40363669	BTF3L4	NONHSAG001470	lncRNA	hsa-miR-136-3p	MI0000475	miRNA	interactions between ncRNAs and miRNAs	Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset	Homo sapiens			TargetScan with Ago CLIP data
ncRI-40390638	BTF3L4	NONHSAG001470	lncRNA	hsa-miR-376c-3p	MI0000776	miRNA	interactions between ncRNAs and miRNAs	Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset	Homo sapiens			TargetScan with Ago CLIP data
ncRI-40410194	BTF3L4	NONHSAG001470	lncRNA	hsa-miR-9-5p	MI0000466	miRNA	interactions between ncRNAs and miRNAs	Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset	Homo sapiens			TargetScan with Ago CLIP data