InterID NcRNAName NcRNAID NcRNAType PartnerName PartnerID PartnerType Description Experiment Organism PubMedID TissueOrCellLine DataSource ncRI-40084800 ZNF833P NONHSAG024853 lncRNA WDR33 Q9C0J8 protein PAR-CLIP showed that WDR33 binds in and very close to the AAUAAA signal PAR-CLIP Homo sapiens 25301781 HEK293 High-throughput data ncRI-40094495 ZNF833P NONHSAG024853 lncRNA CPSF7 Q8N684 protein We performed PAR-CLIP experiments for 3' end processing factors;CLIPseq data were analysed by CLIPdb PAR-CLIP Homo sapiens 22813749 HEK293 High-throughput data ncRI-40105585 ZNF833P NONHSAG024853 lncRNA CSTF2T Q9H0L4 protein We performed PAR-CLIP experiments for 3' end processing factors;CLIPseq data were analysed by CLIPdb eCLIP;PAR-CLIP Homo sapiens 22813749; 22955616 HEK293; K562; HepG2 High-throughput data ncRI-40110580 ZNF833P NONHSAG024853 lncRNA ZC3H7B Q9UGR2 protein The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts;CLIPseq data were analysed by CLIPdb PAR-CLIP Homo sapiens 22681889 HEK293 High-throughput data ncRI-40131786 ZNF833P NONHSAG024853 lncRNA RBM6 P78332 protein CLIP-Seq analysis of RBM5, RBM6 and RBM10, with 2 biological replicates and one non-specific control for each protein. CLIP-Seq Homo sapiens 24332178 HeLa High-throughput data ncRI-40150672 ZNF833P NONHSAG024853 lncRNA MOV10 P22626 protein we demonstrate that MOV10 has an ATP-dependent 5 to 3 in vitro RNA unwinding activity and determine the RNA-binding sites of MOV10 and its helicase mutants using PAR-CLIP. CLIP;PAR-CLIP Homo sapiens 24726324; 26321680 HEK293; MDA-MB-231 High-throughput data ncRI-40159804 ZNF833P NONHSAG024853 lncRNA UPF1 Q92900 protein PAR-CLIP of UPF1 reveals that MOV10 and UPF1 bind to RNA in close proximity. CLIP;PAR-CLIP Homo sapiens 24726324; 27864472 HeLa; HEK293 High-throughput data ncRI-40178247 ZNF833P NONHSAG024853 lncRNA hnRNPA2B1 O88569 protein Nuclear HNRNPA2B1 HITS-CLIP. HITS-CLIP Homo sapiens MDA-MB-231 High-throughput data ncRI-40205895 ZNF833P NONHSAG024853 lncRNA FUS P35637 protein CLIP of Fus/Tls in adult human brain. CLIP-Seq Homo sapiens 23023293 human brain High-throughput data ncRI-40295318 ZNF833P NONHSAG024853 lncRNA hsa-miR-143-3p MI0000459 miRNA interactions between ncRNAs and miRNAs Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset Homo sapiens miRanda with Ago CLIP data ncRI-40300653 ZNF833P NONHSAG024853 lncRNA hsa-miR-182-3p MI0000272 miRNA interactions between ncRNAs and miRNAs Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset Homo sapiens miRanda with Ago CLIP data ncRI-40326349 ZNF833P NONHSAG024853 lncRNA hsa-miR-377-3p MI0000785 miRNA interactions between ncRNAs and miRNAs Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset Homo sapiens TargetScan with Ago CLIP data ncRI-40332968 ZNF833P NONHSAG024853 lncRNA hsa-miR-452-3p MI0001733 miRNA interactions between ncRNAs and miRNAs Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset Homo sapiens miRanda with Ago CLIP data ncRI-40334592 ZNF833P NONHSAG024853 lncRNA hsa-miR-485-3p MI0002469 miRNA interactions between ncRNAs and miRNAs Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset Homo sapiens miRanda with Ago CLIP data ncRI-40335316 ZNF833P NONHSAG024853 lncRNA hsa-mir-488-3p MI0003123 miRNA interactions between ncRNAs and miRNAs Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset Homo sapiens miRanda with Ago CLIP data ncRI-40363863 ZNF833P NONHSAG024853 lncRNA hsa-mir-137 MI0000454 miRNA interactions between ncRNAs and miRNAs Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset Homo sapiens TargetScan with Ago CLIP data ncRI-40384443 ZNF833P NONHSAG024853 lncRNA hsa-miR-329-3p MI0001725 miRNA interactions between ncRNAs and miRNAs Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset Homo sapiens TargetScan with Ago CLIP data ncRI-40387203 ZNF833P NONHSAG024853 lncRNA hsa-miR-362-5p MI0000762 miRNA interactions between ncRNAs and miRNAs Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset Homo sapiens TargetScan with Ago CLIP data ncRI-40399604 ZNF833P NONHSAG024853 lncRNA hsa-miR-493-5p MI0003132 miRNA interactions between ncRNAs and miRNAs Conserved miRNAs target sites predicted by TargetScan and miRanda overlap with the AGO CLIP dataset Homo sapiens TargetScan with Ago CLIP data ncRI-40421315 ZNF833P NONHSAG024853 lncRNA CSTF2 P33240 protein eCLIP experiment on HepG2 against CSTF2 eCLIP Homo sapiens 22955616 HepG2 High-throughput data ncRI-40437733 ZNF833P NONHSAG024853 lncRNA GRWD1 Q9BQ67 protein eCLIP experiment on HepG2 against GRWD1 eCLIP Homo sapiens 22955616 HepG2 High-throughput data ncRI-40441084 ZNF833P NONHSAG024853 lncRNA hnRNPC P07910 protein eCLIP experiment on HepG2 against HNRNPC eCLIP Homo sapiens 22955616 HepG2 High-throughput data ncRI-40444709 ZNF833P NONHSAG024853 lncRNA hnRNPL P14866 protein eCLIP experiment on HepG2 against HNRNPL eCLIP Homo sapiens 22955616 K562; HepG2 High-throughput data ncRI-40451269 ZNF833P NONHSAG024853 lncRNA ILF3 Q12906 protein eCLIP experiment on HepG2 against ILF3 eCLIP Homo sapiens 22955616 K562; HepG2 High-throughput data ncRI-40457610 ZNF833P NONHSAG024853 lncRNA NCBP2 P52298 protein eCLIP experiment on HepG2 against NCBP2 eCLIP Homo sapiens 22955616 K562; HepG2 High-throughput data ncRI-40463393 ZNF833P NONHSAG024853 lncRNA PPIG Q13427 protein eCLIP experiment on HepG2 against PPIG eCLIP Homo sapiens 22955616 HepG2 High-throughput data ncRI-40466101 ZNF833P NONHSAG024853 lncRNA PRPF8 Q6P2Q9 protein eCLIP experiment on HepG2 against PRPF8 eCLIP Homo sapiens 22955616 HepG2 High-throughput data ncRI-40474063 ZNF833P NONHSAG024853 lncRNA TAF15 Q92804 protein eCLIP experiment on HepG2 against TAF15 eCLIP Homo sapiens 22955616 K562; HepG2 High-throughput data ncRI-40486038 ZNF833P NONHSAG024853 lncRNA SFRS1 Q07955 protein eCLIP experiment on HepG2 against SRSF1 eCLIP Homo sapiens 22955616 K562; HepG2 High-throughput data ncRI-40499439 ZNF833P NONHSAG024853 lncRNA UCHL5 Q9Y5K5 protein eCLIP experiment on HepG2 against UCHL5 eCLIP Homo sapiens 22955616 K562; HepG2 High-throughput data ncRI-40507064 ZNF833P NONHSAG024853 lncRNA AKAP8L Q9ULX6 protein eCLIP experiment on K562 against AKAP8L eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40507910 ZNF833P NONHSAG024853 lncRNA BUD13 Q9BRD0 protein eCLIP experiment on K562 against BUD13 eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40513241 ZNF833P NONHSAG024853 lncRNA EWSR1 Q01844 protein eCLIP experiment on K562 against EWSR1 eCLIP;CLIP Homo sapiens 22955616 HeLa; K562 High-throughput data ncRI-40515923 ZNF833P NONHSAG024853 lncRNA FMR1 Q06787 protein eCLIP experiment on K562 against FMR1 eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40518185 ZNF833P NONHSAG024853 lncRNA FUBP2 Q92945 protein eCLIP experiment on K562 against KHSRP eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40519788 ZNF833P NONHSAG024853 lncRNA FXR1 P51114 protein eCLIP experiment on K562 against FXR1 eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40523247 ZNF833P NONHSAG024853 lncRNA HLTF Q14527 protein eCLIP experiment on K562 against HLTF eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40524105 ZNF833P NONHSAG024853 lncRNA HNRNPUL1 Q9BUJ2 protein eCLIP experiment on K562 against HNRNPUL1 eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40525661 ZNF833P NONHSAG024853 lncRNA hnRNPM P52272 protein eCLIP experiment on K562 against HNRNPM eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40526625 ZNF833P NONHSAG024853 lncRNA HNRNPU Q00839 protein eCLIP experiment on K562 against HNRNPU eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40531501 ZNF833P NONHSAG024853 lncRNA KHDR1 Q07666 protein eCLIP experiment on K562 against KHDRBS1 eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40534449 ZNF833P NONHSAG024853 lncRNA METAP2 P50579 protein eCLIP experiment on K562 against METAP2 eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40536742 ZNF833P NONHSAG024853 lncRNA DBHS Q15233 protein eCLIP experiment on K562 against NONO eCLIP;CLIP Homo sapiens 22955616; 28846091 HeLa; K562 High-throughput data ncRI-40538510 ZNF833P NONHSAG024853 lncRNA PAPD1 Q9NVV4 protein eCLIP experiment on K562 against MTPAP eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40539751 ZNF833P NONHSAG024853 lncRNA PPIL4 Q8WUA2 protein eCLIP experiment on K562 against PPIL4 eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40542515 ZNF833P NONHSAG024853 lncRNA RBM15 Q96T37 protein eCLIP experiment on K562 against RBM15 eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40544833 ZNF833P NONHSAG024853 lncRNA RBFOX2 O43251 protein eCLIP experiment on K562 against RBFOX2 eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40546610 ZNF833P NONHSAG024853 lncRNA HNRNPA1 P09651 protein eCLIP experiment on K562 against HNRNPA1 eCLIP;CLIP Homo sapiens 22955616 K562; T-REx-293T High-throughput data ncRI-40548199 ZNF833P NONHSAG024853 lncRNA SAFB2 Q14151 protein eCLIP experiment on K562 against SAFB2 eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40555139 ZNF833P NONHSAG024853 lncRNA TARDBP Q13148 protein eCLIP experiment on K562 against TARDBP eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40556255 ZNF833P NONHSAG024853 lncRNA TIA1 P31483 protein eCLIP experiment on K562 against TIA1 eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40557063 ZNF833P NONHSAG024853 lncRNA TRA2A Q13595 protein eCLIP experiment on K562 against TRA2A eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40557595 ZNF833P NONHSAG024853 lncRNA U2AF1 Q01081 protein eCLIP experiment on K562 against U2AF1 eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40558050 ZNF833P NONHSAG024853 lncRNA U2AF2 P26368 protein eCLIP experiment on K562 against U2AF2 eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40561454 ZNF833P NONHSAG024853 lncRNA YBOX3 P16989 protein eCLIP experiment on K562 against YBX3 eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40563492 ZNF833P NONHSAG024853 lncRNA ZNF622 Q969S3 protein eCLIP experiment on K562 against ZNF622 eCLIP Homo sapiens 22955616 K562 High-throughput data ncRI-40589648 ZNF833P NONHSAG024853 lncRNA LAR4B Q92615 protein derived from CLIP-seq dataset CLIP Homo sapiens 26001795 DMEM High-throughput data ncRI-40599639 ZNF833P NONHSAG024853 lncRNA SPPL3 Q8TCT6 protein derived from CLIP-seq dataset CLIP Homo sapiens 27184842 MGG8 High-throughput data ncRI-40607859 ZNF833P NONHSAG024853 lncRNA FBL P22087 protein derived from CLIP-seq dataset CLIP Homo sapiens 28031372 Flp-In 293 High-throughput data ncRI-40614612 ZNF833P NONHSAG024853 lncRNA IGF2BP3 O00425 protein derived from CLIP-seq dataset CLIP Homo sapiens 27068461 H9ES High-throughput data ncRI-40616635 ZNF833P NONHSAG024853 lncRNA FTO Q9C0B1 protein derived from CLIP-seq dataset CLIP Homo sapiens HEK293 High-throughput data ncRI-40627194 ZNF833P NONHSAG024853 lncRNA PSF P23246 protein derived from CLIP-seq dataset CLIP Homo sapiens 28846091 HeLa High-throughput data ncRI-40630194 ZNF833P NONHSAG024853 lncRNA HDAC9 Q9UKV0 protein derived from CLIP-seq dataset CLIP Homo sapiens 29520069 Aortic Smooth Muscle High-throughput data ncRI-40631424 ZNF833P NONHSAG024853 lncRNA SMARCA4 P51532 protein derived from CLIP-seq dataset CLIP Homo sapiens 29520069 Aortic Smooth Muscle High-throughput data ncRI-41006583 ZNF833P NONHSAG024853 lncRNA C1QL2 ENSG00000144119 mRNA RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HEK293T RISE database ncRI-41006828 ZNF833P NONHSAG024853 lncRNA MCC ENSG00000171444 mRNA RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HeLa; HEK293T RISE database ncRI-41008956 ZNF833P NONHSAG024853 lncRNA SLC8A3 ENSG00000100678 mRNA RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HEK293T RISE database ncRI-41009805 ZNF833P NONHSAG024853 lncRNA GPR55 ENSG00000135898 mRNA RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HeLa; HEK293T RISE database ncRI-41009823 ZNF833P NONHSAG024853 lncRNA ACSF3 ENSG00000176715 mRNA RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HEK293T RISE database ncRI-41010773 ZNF833P NONHSAG024853 lncRNA CROCCP1 ENSG00000225769 pseudogene RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HEK293T RISE database ncRI-41011198 ZNF833P NONHSAG024853 lncRNA AC011899 ENSG00000231980 ncRNA RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HEK293T RISE database ncRI-41011631 ZNF833P NONHSAG024853 lncRNA RP11-98G7.1 NONHSAG059492.2 lncRNA RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HEK293T RISE database ncRI-41012429 ZNF833P NONHSAG024853 lncRNA SLC15A2 ENSG00000163406 mRNA RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HEK293T RISE database ncRI-41012430 ZNF833P NONHSAG024853 lncRNA RN7SL632P ENSG00000241524 ncRNA RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HEK293T RISE database ncRI-41013240 ZNF833P NONHSAG024853 lncRNA NADSYN1 ENSG00000172890 mRNA RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HEK293T RISE database ncRI-41013515 ZNF833P NONHSAG024853 lncRNA OR8R1P ENSG00000256347 pseudogene RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HEK293T RISE database ncRI-41013577 ZNF833P NONHSAG024853 lncRNA DNAJC22 ENSG00000178401 mRNA RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HEK293T RISE database ncRI-41013701 ZNF833P NONHSAG024853 lncRNA LINC00638 NONHSAG016071.3 lncRNA RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HEK293T RISE database ncRI-41018508 ZNF833P NONHSAG024853 lncRNA COL5A2 ENSG00000204262 mRNA RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HeLa RISE database ncRI-41027524 ZNF833P NONHSAG024853 lncRNA STARD13 ENSG00000133121 mRNA RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HeLa RISE database ncRI-41027601 RPI001_350119 NONHSAG004342.2 lncRNA ZNF833P NONHSAG024853 lncRNA RNA-RNA interaction from RISE database PARIS Homo sapiens 27180905 HeLa RISE database ncRI-50000136 AC008543.1 ENSG00000197332 lncRNA GEMIN5 Q8TEQ6 protein binding derived from CLIP-seq dataset(GSE102268); Gemin5 RBS1 Domain CLIP-seq CLIP-seq Homo sapiens 29771365 HEK293 High-throughput data ncRI-50000323 AC008543.1 ENSG00000197332 lncRNA GEMIN5 Q8TEQ6 protein binding derived from CLIP-seq dataset(GSE102268); Gemin5 RBS2 Domain CLIP-seq CLIP-seq Homo sapiens 29771365 HEK293 High-throughput data ncRI-50000446 AC008543.1 ENSG00000197332 lncRNA MTA1 Q13330 protein binding derived from CLIP-seq dataset(GSE102634) CLIP-seq Homo sapiens HCT116 High-throughput data ncRI-50001338 AC008543.1 ENSG00000197332 lncRNA TRIM25 Q14258 protein binding derived from CLIP-seq dataset(GSE104949) CLIP-seq Homo sapiens 29117863 HeLa High-throughput data ncRI-50005423 AC008543.1 ENSG00000197332 lncRNA DHX36 Q9H2U1 protein binding derived from CLIP-seq dataset(GSE105171); DHX36-iso1 E335A overexpression PAR-CLIP Homo sapiens 31160600 HEK293 High-throughput data ncRI-50011426 AC008543.1 ENSG00000197332 lncRNA DHX36 Q9H2U1 protein binding derived from CLIP-seq dataset(GSE105171); DHX36-iso2 overexpression PAR-CLIP Homo sapiens 31160600 HEK293 High-throughput data ncRI-50015779 AC008543.1 ENSG00000197332 lncRNA SRSF2 Q01130 protein binding derived from CLIP-seq dataset(GSE111900); SRSF2 WT HITS-CLIP HITS-CLIP Homo sapiens 29858584 Human Erythroleukemia Cell Line (HEL) High-throughput data ncRI-50015893 AC008543.1 ENSG00000197332 lncRNA SRSF2 Q01130 protein binding derived from CLIP-seq dataset(GSE111900); SRSF2 P95H HITS-CLIP HITS-CLIP Homo sapiens 29858584 Human Erythroleukemia Cell Line (HEL) High-throughput data ncRI-50016011 AC008543.1 ENSG00000197332 lncRNA eIF4E P06730 protein binding derived from CLIP-seq dataset(GSE112276) PAR-CLIP Homo sapiens 31031084 HEK293T High-throughput data ncRI-50016873 AC008543.1 ENSG00000197332 lncRNA WDR4 P57081 protein binding derived from CLIP-seq dataset(GSE112276) PAR-CLIP Homo sapiens 31031084 HEK293T High-throughput data ncRI-50018176 AC008543.1 ENSG00000197332 lncRNA DDX6 P26196 protein binding derived from CLIP-seq dataset(GSE112782) eCLIP Homo sapiens 31588046 GEN1C High-throughput data ncRI-50020552 AC008543.1 ENSG00000197332 lncRNA ELAVL1 Q15717 protein binding derived from CLIP-seq dataset(GSE113628) pCLIP Homo sapiens 30824702 HEK293 High-throughput data ncRI-50022386 AC008543.1 ENSG00000197332 lncRNA RBMX P38159 protein binding derived from CLIP-seq dataset(GSE114311) PAR-CLIP Homo sapiens 31445886 HEK293T High-throughput data ncRI-50027179 AC008543.1 ENSG00000197332 lncRNA SOX2 P48431 protein binding derived from CLIP-seq dataset(GSE115273) PAR-CLIP Homo sapiens 32016422 HEK293T High-throughput data ncRI-50031437 AC008543.1 ENSG00000197332 lncRNA RBMX P38159 protein binding derived from CLIP-seq dataset(GSE115429) CLIP-seq Homo sapiens 30150775 HCT116 High-throughput data ncRI-50032008 AC008543.1 ENSG00000197332 lncRNA FUBP1 Q96AE4 protein binding derived from CLIP-seq dataset(GSE115429) CLIP-seq Homo sapiens 30150775 HCT116 High-throughput data ncRI-50032432 AC008543.1 ENSG00000197332 lncRNA FUBP3 Q96I24 protein binding derived from CLIP-seq dataset(GSE115429) CLIP-seq Homo sapiens 30150775 HCT116 High-throughput data ncRI-50033437 AC008543.1 ENSG00000197332 lncRNA CNOT7 Q9UIV1 protein binding derived from CLIP-seq dataset(GSE117290) eCLIP Homo sapiens 32807991 HEK293T High-throughput data ncRI-50033944 AC008543.1 ENSG00000197332 lncRNA AIMP1 Q12904 protein binding derived from CLIP-seq dataset(GSE117290) eCLIP Homo sapiens 32807991 HEK293T High-throughput data ncRI-50034476 AC008543.1 ENSG00000197332 lncRNA CLK3 P49761 protein binding derived from CLIP-seq dataset(GSE117290) eCLIP Homo sapiens 32807991 HEK293T High-throughput data ncRI-50034910 AC008543.1 ENSG00000197332 lncRNA DDX6 P26196 protein binding derived from CLIP-seq dataset(GSE117290) eCLIP Homo sapiens 32807991 HEK293T High-throughput data ncRI-50035555 AC008543.1 ENSG00000197332 lncRNA MEX3C Q5U5Q3 protein binding derived from CLIP-seq dataset(GSE117290) eCLIP Homo sapiens 32807991 HEK293T High-throughput data ncRI-50036022 AC008543.1 ENSG00000197332 lncRNA PARN O95453 protein binding derived from CLIP-seq dataset(GSE117290) eCLIP Homo sapiens 32807991 HEK293T High-throughput data ncRI-50037982 AC008543.1 ENSG00000197332 lncRNA IFIT2 P09913 protein binding derived from CLIP-seq dataset(GSE117290) eCLIP Homo sapiens 32807991 HEK293T High-throughput data ncRI-50039389 AC008543.1 ENSG00000197332 lncRNA TOB1 P50616 protein binding derived from CLIP-seq dataset(GSE117290) eCLIP Homo sapiens 32807991 HEK293T High-throughput data ncRI-50040024 AC008543.1 ENSG00000197332 lncRNA FUS P35637 protein binding derived from CLIP-seq dataset(GSE118347); Flag-wt-FUS PAR-CLIP Homo sapiens 31242416 iPSC-derived motoneurons High-throughput data ncRI-50040237 AC008543.1 ENSG00000197332 lncRNA FUS P35637 protein binding derived from CLIP-seq dataset(GSE118347); Endogeneous wt FUS PAR-CLIP Homo sapiens 31242416 iPSC-derived motoneurons High-throughput data ncRI-50040867 AC008543.1 ENSG00000197332 lncRNA FUS P35637 protein binding derived from CLIP-seq dataset(GSE118347); Endogeneous FUS-P525L PAR-CLIP Homo sapiens 31242416 iPSC-derived motoneurons High-throughput data ncRI-50041386 AC008543.1 ENSG00000197332 lncRNA EXOSC10 Q01780 protein binding derived from CLIP-seq dataset(GSE120574) iCLIP Homo sapiens 30840897 HEK293T High-throughput data ncRI-50041999 AC008543.1 ENSG00000197332 lncRNA SCAF8 Q9UPN6 protein binding derived from CLIP-seq dataset(GSE121821); SCAF8 in soluble fractions PAR-CLIP Homo sapiens 31104839 Flp-In T-REx 293 High-throughput data ncRI-50042120 AC008543.1 ENSG00000197332 lncRNA SCAF4 O95104 protein binding derived from CLIP-seq dataset(GSE121821); SCAF4 in chromatin fractions PAR-CLIP Homo sapiens 31104839 Flp-In T-REx 293 High-throughput data ncRI-50042719 AC008543.1 ENSG00000197332 lncRNA SCAF8 Q9UPN6 protein binding derived from CLIP-seq dataset(GSE121821); SCAF8 in chromatin fractions PAR-CLIP Homo sapiens 31104839 Flp-In T-REx 293 High-throughput data ncRI-50043955 AC008543.1 ENSG00000197332 lncRNA DDX3X O00571 protein binding derived from CLIP-seq dataset(GSE125114) PAR-CLIP Homo sapiens 33905506 HEK293 High-throughput data ncRI-50046783 AC008543.1 ENSG00000197332 lncRNA hnRNPD Q14103 protein binding derived from CLIP-seq dataset(GSE131210) easyCLIP Homo sapiens 33692367 HEK293T High-throughput data ncRI-50047366 AC008543.1 ENSG00000197332 lncRNA Rbfox1 Q9NWB1 protein binding derived from CLIP-seq dataset(GSE131210) easyCLIP Homo sapiens 33692367 HEK293T High-throughput data ncRI-50048373 AC008543.1 ENSG00000197332 lncRNA CELF1 Q92879 protein binding derived from CLIP-seq dataset(GSE131210); easyCLIP CELF1 easyCLIP Homo sapiens 33692367 HEK293T High-throughput data ncRI-50048717 AC008543.1 ENSG00000197332 lncRNA SRSF1 Q07955 protein binding derived from CLIP-seq dataset(GSE131745) HITS-CLIP Homo sapiens 31300274 MDA-LM2 High-throughput data ncRI-50049734 AC008543.1 ENSG00000197332 lncRNA ELAVL1 Q15717 protein binding derived from CLIP-seq dataset(GSE133620) PAR-CLIP Homo sapiens 31358969 T24 High-throughput data ncRI-50050546 AC008543.1 ENSG00000197332 lncRNA UPF1 Q92900 protein binding derived from CLIP-seq dataset(GSE134059); UPF1_isoform_1 CLIP Homo sapiens HEK293 Trex High-throughput data ncRI-50051128 AC008543.1 ENSG00000197332 lncRNA UPF1 Q92900 protein binding derived from CLIP-seq dataset(GSE134059); UPF1_isoform_2 CLIP Homo sapiens HEK293 Trex High-throughput data ncRI-50052355 AC008543.1 ENSG00000197332 lncRNA AGO1 Q9UL18 protein binding derived from CLIP-seq dataset(GSE136907); cell treat with Normoxia iCLIP Homo sapiens Human microvascular endothelial cells High-throughput data ncRI-50053422 AC008543.1 ENSG00000197332 lncRNA YTHDF2 Q9Y5A9 protein binding derived from CLIP-seq dataset(GSE137258); MYC-ER HMEC eCLIP-seq Homo sapiens HMEC High-throughput data ncRI-50053963 AC008543.1 ENSG00000197332 lncRNA YTHDF2 Q9Y5A9 protein binding derived from CLIP-seq dataset(GSE137258); MYC-ER HMEC treat with 4-Hydroxytamoxifen eCLIP-seq Homo sapiens HMEC High-throughput data ncRI-50054458 AC008543.1 ENSG00000197332 lncRNA YTHDF2 Q9Y5A9 protein binding derived from CLIP-seq dataset(GSE137258) eCLIP-seq Homo sapiens MDA-MB-231-LM2 High-throughput data ncRI-50059562 AC008543.1 ENSG00000197332 lncRNA IGF2BP1 Q9NZI8 protein binding derived from CLIP-seq dataset(GSE138063) PAR-CLIP Homo sapiens 31768017 K562 CML-derived cell line High-throughput data ncRI-50068708 AC008543.1 ENSG00000197332 lncRNA IGF2BP3 O00425 protein binding derived from CLIP-seq dataset(GSE138063) PAR-CLIP Homo sapiens 31768017 K562 CML-derived cell line High-throughput data ncRI-50074724 AC008543.1 ENSG00000197332 lncRNA HNRNPU Q00839 protein binding derived from CLIP-seq dataset(GSE138661); cell cytoplasmic fraction MY-CLIP Homo sapiens 32302342 HeLa High-throughput data ncRI-50075073 AC008543.1 ENSG00000197332 lncRNA FUS P35637 protein binding derived from CLIP-seq dataset(GSE139263) HITS-CLIP Homo sapiens 33311468 SH-SY5Y High-throughput data ncRI-50076212 AC008543.1 ENSG00000197332 lncRNA ZC3HAV1 Q7Z2W4 protein binding derived from CLIP-seq dataset(GSE139667) PAR-CLIP Homo sapiens 31719195 HEK293T High-throughput data ncRI-50077751 AC008543.1 ENSG00000197332 lncRNA DDX43 Q9NXZ2 protein binding derived from CLIP-seq dataset(GSE144647); DDX43 KH 89aa CLIP Homo sapiens 33199368 HEK293T High-throughput data ncRI-50078554 AC008543.1 ENSG00000197332 lncRNA FTO Q9C0B1 protein binding derived from CLIP-seq dataset(GSE146207) CLIP Homo sapiens 32213595 HEK293T High-throughput data ncRI-50081051 AC008543.1 ENSG00000197332 lncRNA ZMAT3 Q9HA38 protein binding derived from CLIP-seq dataset(GSE150715); cell treat with DMSO PAR-CLIP Homo sapiens 33334821 HCT116 High-throughput data ncRI-50084672 AC008543.1 ENSG00000197332 lncRNA ZMAT3 Q9HA38 protein binding derived from CLIP-seq dataset(GSE150715); cell treat with Nutlin-3a PAR-CLIP Homo sapiens 33334821 HCT116 High-throughput data ncRI-50087466 AC008543.1 ENSG00000197332 lncRNA A1CF Q9NQ94 protein binding derived from CLIP-seq dataset(GSE154168) easyCLIP Homo sapiens 33692367 HEK293T High-throughput data ncRI-50088830 AC008543.1 ENSG00000197332 lncRNA A1CF Q9NQ94 protein binding derived from CLIP-seq dataset(GSE154168); easyCLIP A1CF-E34K easyCLIP Homo sapiens 33692367 HEK293T High-throughput data ncRI-50090866 AC008543.1 ENSG00000197332 lncRNA FUBP1 Q96AE4 protein binding derived from CLIP-seq dataset(GSE154168) easyCLIP Homo sapiens 33692367 HEK293T High-throughput data ncRI-50091800 AC008543.1 ENSG00000197332 lncRNA FUBP1 Q96AE4 protein binding derived from CLIP-seq dataset(GSE154168); easyCLIP FUBP1-R429C easyCLIP Homo sapiens 33692367 HEK293T High-throughput data ncRI-50092902 AC008543.1 ENSG00000197332 lncRNA KHDRBS2 Q5VWX1 protein binding derived from CLIP-seq dataset(GSE154168) easyCLIP Homo sapiens 33692367 HEK293T High-throughput data ncRI-50094589 AC008543.1 ENSG00000197332 lncRNA KHDRBS2 Q5VWX1 protein binding derived from CLIP-seq dataset(GSE154168); easyCLIP KHDRBS2-R168C easyCLIP Homo sapiens 33692367 HEK293T High-throughput data ncRI-50096870 AC008543.1 ENSG00000197332 lncRNA TIA1 P31483 protein binding derived from CLIP-seq dataset(GSE155728) eCLIP Homo sapiens 33963355 HEK293T High-throughput data ncRI-50098310 AC008543.1 ENSG00000197332 lncRNA KHDRBS2 Q5VWX1 protein binding derived from CLIP-seq dataset(GSE162366) easyCLIP Homo sapiens 33692367 A375 High-throughput data ncRI-50099054 AC008543.1 ENSG00000197332 lncRNA AGO2 Q9UKV8 protein binding derived from CLIP-seq dataset(GSE163925) fCLIP Homo sapiens 33503264 Flp-In T-REx 293 High-throughput data ncRI-50100222 AC008543.1 ENSG00000197332 lncRNA AGO2 Q9UKV8 protein binding derived from CLIP-seq dataset(GSE163925) fPARCLIP Homo sapiens 33503264 Flp-In T-REx 293 High-throughput data ncRI-50101608 AC008543.1 ENSG00000197332 lncRNA FUBP3 Q96I24 protein binding derived from CLIP-seq dataset(GSE163925) fPARCLIP Homo sapiens 33503264 Flp-In T-REx 293 High-throughput data ncRI-50102475 AC008543.1 ENSG00000197332 lncRNA KHSRP Q92945 protein binding derived from CLIP-seq dataset(GSE163925) fPARCLIP Homo sapiens 33503264 Flp-In T-REx 293 High-throughput data ncRI-50103207 AC008543.1 ENSG00000197332 lncRNA YTHDC1 Q96MU7 protein binding derived from CLIP-seq dataset(GSE165473); HIV-1-infected CD4+ 293T cells PAR-CLIP Homo sapiens 34140354 HEK293T High-throughput data ncRI-50104471 AC008543.1 ENSG00000197332 lncRNA SP1 P08047 protein binding derived from CLIP-seq dataset(GSE165739) iCLIP Homo sapiens HEK293 High-throughput data ncRI-50106360 AC008543.1 ENSG00000197332 lncRNA CPSF1 Q10570 protein binding derived from CLIP-seq dataset(GSE165739) iCLIP Homo sapiens HEK293 High-throughput data ncRI-50108016 AC008543.1 ENSG00000197332 lncRNA CPSF7 Q8N684 protein binding derived from CLIP-seq dataset(GSE165739) iCLIP Homo sapiens HEK293 High-throughput data ncRI-50109693 AC008543.1 ENSG00000197332 lncRNA USF2 Q15853 protein binding derived from CLIP-seq dataset(GSE165739) iCLIP Homo sapiens HEK293 High-throughput data ncRI-50110888 AC008543.1 ENSG00000197332 lncRNA hTrmt13 protein protein binding derived from CLIP-seq dataset(GSE166274) CLIP Homo sapiens 34850409 MDA-MB-231 cells High-throughput data ncRI-50111757 AC008543.1 ENSG00000197332 lncRNA DR1 Q01658 protein binding derived from CLIP-seq dataset(GSE173628) HITS-CLIP Homo sapiens 34559986 MCF7 High-throughput data ncRI-50112660 AC008543.1 ENSG00000197332 lncRNA RELA Q04206 protein binding derived from CLIP-seq dataset(GSE197707) clip seq Homo sapiens High-throughput data ncRI-50113263 AC008543.1 ENSG00000197332 lncRNA EWSR1 Q01844 protein binding derived from CLIP-seq dataset(GSE98836) HITS-CLIP Homo sapiens HeLa High-throughput data ncRI-50115529 AC008543.1 ENSG00000197332 lncRNA PTBP1 P26599 protein binding derived from CLIP-seq dataset(GSE111406); GoldCLIP_PTB_UVC GoldCLIP Homo sapiens 29709556 HEK293T High-throughput data ncRI-50116340 AC008543.1 ENSG00000197332 lncRNA ICP27 - protein binding derived from CLIP-seq dataset(GSE128753); herpes simplex virus type 1 (HSV-1) ICP27 protein; ICP27 overexpressed Hela eCLIP Homo sapiens 31941886 HeLa High-throughput data